DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp33B and tsp-2

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_498803.1 Gene:tsp-2 / 259752 WormBaseID:WBGene00006628 Length:234 Species:Caenorhabditis elegans


Alignment Length:156 Identity:33/156 - (21%)
Similarity:58/156 - (37%) Gaps:53/156 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 YLFGIY--VFGAQVVVTFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVIIASGFGCVWN---- 110
            :::.:|  ::|..::...|..|.:...|.:::......|:|.|..|   ::...|...:|:    
 Worm    66 WIYSVYWSIYGLCIIAGPLSIIGLIGAISQKKPVLATCLVLIVIFF---IMELGGSIALWSKRGS 127

  Fly   111 ----LYRGVDVLENAADTSLTRGI-DMYYSCPEWKLLWDGLQWHKECCGVHGYKDWMNAEWMPRR 170
                |||      .|.|..||..: |:..           :|....||||      .:.:|    
 Worm   128 LRSLLYR------FANDIYLTNSVFDISI-----------IQNTYNCCGV------QDGQW---- 165

  Fly   171 ENNCTSMVLAPFACCKRSCD-SCFNN 195
              .|.:   ||      ||| :.||:
 Worm   166 --KCPN---AP------SCDIALFNS 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 21/86 (24%)
tsp-2NP_498803.1 Tetraspanin <84..203 CDD:459767 31/138 (22%)

Return to query results.
Submit another query.