DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Prph2

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_037153.1 Gene:Prph2 / 25534 RGDID:3549 Length:346 Species:Rattus norvegicus


Alignment Length:214 Identity:49/214 - (22%)
Similarity:80/214 - (37%) Gaps:53/214 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 AMWRRIWRRRCTPNIRLLLSVWAFYSCVIIASGFGCVWNLYRGVDVLENAADTSLTRGIDMYYS- 135
            |.|:        |.::|.|:|..|::.::......|.  |.||  .||:.....|..|:..|.. 
  Rat    92 AKWK--------PWLKLYLAVCVFFNVILFLVALCCF--LLRG--SLESTLAYGLKNGMKYYRDT 144

  Fly   136 -----CPEWKLLWDGLQWHKECCGVHGYKDWMNAEWMPRR-------------ENNCTSMVL--- 179
                 |...|.: |.||...:|||.:|::||...:|:..|             ::|.....|   
  Rat   145 DTPGRCFMKKTI-DMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVDG 208

  Fly   180 APFACCKRSCDSCFNNFLPSEGQSIGGNSRQPFPALTVDSIN--ANGCLPA---FVSAVWNCF-Y 238
            .||:||..|...      |.....:..||.........:.:|  ..||..|   :.|::.|.. .
  Rat   209 VPFSCCNPSSPR------PCIQYQLTNNSAHYSYDHQTEELNLWLRGCRAALLNYYSSLMNSMGV 267

  Fly   239 ILMALWVL------ALKFL 251
            :.:.:|:.      .|:||
  Rat   268 VTLLIWLFEVSITAGLRFL 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 36/151 (24%)
Prph2NP_037153.1 Tetraspanin 16..181 CDD:459767 28/101 (28%)
peripherin_like_LEL 120..262 CDD:239415 36/152 (24%)
Interaction with MREG. /evidence=ECO:0000250 341..346
Blue background indicates that the domain is not in the aligned region.

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