DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp33B and Cd9

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_063141640.1 Gene:Cd9 / 24936 RGDID:2318 Length:249 Species:Rattus norvegicus


Alignment Length:204 Identity:37/204 - (18%)
Similarity:69/204 - (33%) Gaps:67/204 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LVYGYLFGIYVFGAQVVVTFLCSIAMWRR-------IWRRRCTPNIRLLLSVWAFYSCVIIASGF 105
            |::|:.|..::.|..|:     :|.:|.|       |:.:....:        :||:.|.|..|.
  Rat    13 LLFGFNFIFWLAGIAVL-----AIGLWLRFDSQTKSIFEQETNHS--------SFYTGVYILIGA 64

  Fly   106 G-------------------CVWNLYRG----VDVLENAA-------DTSLTRGIDMYYSCPEWK 140
            |                   |:..|:.|    :..:|.||       ...:.:.:..:|.....|
  Rat    65 GALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKDEVIKELQEFYKDTYQK 129

  Fly   141 L---------LWDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCKRSCDSCFNNF 196
            |         ....:.....|||:.|..:...::..|:::      ||..|..  :||....:..
  Rat   130 LRNKDEPQRETLKAIHMALNCCGIAGGVEQFISDICPKKQ------VLESFQV--KSCPDAIDEV 186

  Fly   197 LPSEGQSIG 205
            ..|:...||
  Rat   187 FHSKFHIIG 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 20/114 (18%)
Cd9XP_063141640.1 None

Return to query results.
Submit another query.