DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and tsp-16

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_509183.2 Gene:tsp-16 / 192066 WormBaseID:WBGene00006642 Length:311 Species:Caenorhabditis elegans


Alignment Length:220 Identity:42/220 - (19%)
Similarity:81/220 - (36%) Gaps:47/220 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TEAVIGLLILVVTAYYHTVLTGYLSDIECRLVYGYLFGIYVFGAQVVVTFLCSIAMWRRIWRRRC 82
            |.:|||..::|...|. .:|.|.||.:...:.:   |.|.:...::::|.:.:...:..|     
 Worm    50 TASVIGTNLIVYCPYL-LILVGILSFVMTPVRF---FSIILNDNKIMITHMFATIFFATI----- 105

  Fly    83 TPNIRLLLSVWAFYSCVIIASGFGCVWNLYRGVDVLENAADTS----LTRGIDMYYSCPEWKLLW 143
                                    |......|.|:..:.:.:.    :...|...|..|....:.
 Worm   106 ------------------------CAMTAILGYDLNSHVSSSDMEHWMKHSIKEDYGNPTAPHIM 146

  Fly   144 DGLQWHK-----ECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCKRSCDSCFNNFLPSEGQS 203
            :  :|:|     :||||....|::.::|...::.:....:  |.:|| .||.:....|..:..:.
 Worm   147 E--EWNKAHRQFKCCGVRNLTDFVESKWYIMQKKHPRQRI--PDSCC-ASCATMHERFCVAFFKE 206

  Fly   204 IGGNSRQPFPALTVDSINANGCLPA 228
            .|....|.....|:....:||||.|
 Worm   207 PGNQPHQLVKNQTICLQASNGCLSA 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 27/126 (21%)
tsp-16NP_509183.2 Tetraspanin 26..174 CDD:459767 28/158 (18%)
uroplakin_I_like_LEL 118..210 CDD:239409 18/96 (19%)

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