DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and tsp-5

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_502621.3 Gene:tsp-5 / 192061 WormBaseID:WBGene00006631 Length:241 Species:Caenorhabditis elegans


Alignment Length:252 Identity:54/252 - (21%)
Similarity:89/252 - (35%) Gaps:81/252 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IGLLIL-VVTAYY--------------HTVLTGYLS--DIECRLVYGYLFGIYVFGAQVVVTFLC 69
            :||::: |:..:|              .|.|...||  :|||..||..: .|.:.|..||:.|..
 Worm    19 LGLIVVGVIITWYSIWMVLHQFEVTVARTSLVNLLSVDNIECFYVYRTI-SIMIGGCMVVLGFCG 82

  Fly    70 SIAMWRRIWRRRCTPNIRLLLSVWAFYSCVIIASGFGCVWN---------LYRGVDVLENAADTS 125
            ..|:.   :..:...::.|:| |:..:...|:|.......|         :||. :::.|..:.|
 Worm    83 CFAVG---FGSKTALSVHLVL-VFIVFVVKIVAIVMFLANNDHLRREFVGVYRD-ELVANYHNNS 142

  Fly   126 LTRGIDMYYSCPEWKLLWDGLQW-HK--ECCGVHGYKDWMNAEWMPR-----------RENNCTS 176
            .|:               :.|.| |.  :|||.:|.:|::.|...|.           |...|..
 Worm   143 RTK---------------NTLDWVHTSLKCCGANGCEDFLPAGNFPTSCECGTKNAVVRMEGCAL 192

  Fly   177 MVLAPF-------ACCKRSCDSCFNNFLPSEGQSIGGNSRQPFPALTVDSINANGCL 226
            :..|.|       |.....|      .|...|..|       |.|:.:|.|....|:
 Worm   193 ITWAVFEDGTLQVAFLGLIC------MLIELGLMI-------FAAIVIDRIRREPCV 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 29/136 (21%)
tsp-5NP_502621.3 Tetraspanin 11..167 CDD:459767 38/168 (23%)
tetraspanin_LEL 116..191 CDD:239401 17/90 (19%)

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