DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and tsp-9

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:241 Identity:51/241 - (21%)
Similarity:75/241 - (31%) Gaps:99/241 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 IRLLLSVWAFYSCVIIASGFG---CVWNLYRGVDVLENAADTSLTR---GIDM-------YYSCP 137
            |:||..|..|:.|:     ||   |.::|:..:|....:..:...|   |||.       .|...
 Worm     8 IKLLFFVINFFICI-----FGALICGFSLWANLDKNFGSHLSDFVRQIEGIDQKLVNEIAEYQAS 67

  Fly   138 EWKLLWDG----LQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVL------------------A 180
            .|.|:..|    |.....|||.                 .|.|.||                  .
 Worm    68 LWILVAVGALLFLVGFFGCCGA-----------------GCESPVLLGLFIFIIVILTAVELGAT 115

  Fly   181 PFACCKRSCDSCFNNFLPSEGQSIGGNSR--------QPF---------PALTVDSINANG-CLP 227
            .||...|      ..|:.|..|.:..:|.        :|.         .|.|.:....:| |.|
 Worm   116 VFAMTNR------EEFVSSIQQVLKKSSATYELRKNIKPIQNVFQCCGATAQTQNRYIQDGLCGP 174

  Fly   228 AFVSAVWNCF------------------YILMALWVLALKFLIVLC 255
            ..:||..|||                  ::|:|:.:.|:.|..:||
 Worm   175 EPLSAPVNCFDRISHMVQSWGESIVVVAFLLLAIELFAILFSCILC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 33/174 (19%)
tsp-9NP_508232.1 Tetraspanin 8..221 CDD:459767 51/241 (21%)

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