DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and Tsp68C

DIOPT Version :9

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster


Alignment Length:275 Identity:51/275 - (18%)
Similarity:89/275 - (32%) Gaps:67/275 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VIGLLILVVTAYYHT------------VLTGYLSDIECRLVYGYLFGIYVFGAQVVVTFLCSIAM 73
            :.|||::|...|..:            ..:..||.:...|::....|:.:.|  .|.|....:..
  Fly    20 ICGLLLVVSGLYIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIALGVAIAG--FVATLAAVVGF 82

  Fly    74 WRRIWRRRCTPNIRLLLSVWAFYS----CVIIASGFGCVWNLYRGVDVLENAADTSLTRGIDMYY 134
            |.......|...|..|..|....:    |:.|.     :|....|:.:.|    |.:.|.:...|
  Fly    83 WASCLHTYCFLTIYFLSVVVLLLTESVLCLAIT-----LWPHCLGISLDE----TQMVRSLQSNY 138

  Fly   135 SCPEWKLLWDGL---QWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPFACCKRSCDSCFNNF 196
            ..|..:...:.|   |....|||:....|:..:.|  |.:.........|.:||          |
  Fly   139 GVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLW--RLQGYGQRNWPVPLSCC----------F 191

  Fly   197 LPSEGQSIGGNSRQPFPALTVDSI---------NANGCLP-----------AFVSAVWNCFYILM 241
            |.:.|.|:.....:|.......|:         :...|||           .|:.|     .:::
  Fly   192 LKNAGHSMAYLDPKPANESMCQSLERLSYERERHTESCLPHLDNWYREQYSIFLGA-----SLIL 251

  Fly   242 ALWVLALKFLIVLCC 256
            |:....:...|::.|
  Fly   252 AMIEFCVLLAIIMSC 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 Tetraspannin 20..256 CDD:278750 50/273 (18%)
CD151_like_LEL 112..237 CDD:239408 28/147 (19%)
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 51/275 (19%)
tetraspanin_LEL 117..241 CDD:239401 27/139 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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