DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and UPK1A

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_054175633.1 Gene:UPK1A / 11045 HGNCID:12577 Length:313 Species:Homo sapiens


Alignment Length:204 Identity:55/204 - (26%)
Similarity:79/204 - (38%) Gaps:50/204 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 FGAQVVVTFLCSIAMWRRIWRRRCTPNIRLLLSVWAFYSCVIIASGFGCVWNLYRGVDVLENAAD 123
            |...:|.:|....|:.||  |......:.|:|.|:.|.....|.|        |...|.:  .::
Human    73 FSFFMVASFGVGAALCRR--RSMVLTYLVLMLIVYIFECASCITS--------YTHRDYM--VSN 125

  Fly   124 TSL-TRGIDMYYSC-----PEWKLLWDGLQWHKECCGVHGYKDWMNAEWMPRRENNCTSMVLAPF 182
            .|| |:.:..:||.     .|...|||.:...:||||..|..||:|.....|.   .|..|:.|:
Human   126 PSLITKQMLTFYSADTDQGQELTRLWDRVMIEQECCGTSGPMDWVNFTSAFRA---ATPEVVFPW 187

  Fly   183 --ACCKRSCDSCFNNFLP--SEGQSIGGNSRQPFPALTVDSINANGCLPAFVSAV--------WN 235
              .||:|:     .||:|  .||..:|          .:|.:...||......|:        |.
Human   188 PPLCCRRT-----GNFIPLNEEGCRLG----------HMDYLFTKGCFEHIGHAIDSYTWGISWF 237

  Fly   236 CFYILMALW 244
            .|.|||  |
Human   238 GFAILM--W 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 37/142 (26%)
UPK1AXP_054175633.1 Tetraspanin 25..>163 CDD:459767 27/101 (27%)
uroplakin_I_like_LEL 113..231 CDD:239409 38/145 (26%)

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