DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and prph2

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_002934729.1 Gene:prph2 / 100491776 XenbaseID:XB-GENE-985594 Length:349 Species:Xenopus tropicalis


Alignment Length:250 Identity:51/250 - (20%)
Similarity:84/250 - (33%) Gaps:90/250 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 WRRRCTP--NIRLLLSVWAFYSCVIIASGFGCVWNLYRGVDVLENAADTSLTRGID---MYYSCP 137
            |:....|  .:.||.:|:.|::        |.|..|.||      :.|::|..|:.   .||...
 Frog    94 WKPMLKPYLTVCLLFNVFIFFT--------GVVCFLARG------SLDSTLAHGLKNGMRYYKDT 144

  Fly   138 E------WKLLWDGLQWHKECCGVHGYKDWMNAEWMPRR-------------ENNCTSMVL---A 180
            :      .|...|.||...:|||..|::||...:|:..|             ::|.....|   .
 Frog   145 DTPGRCFMKKTIDLLQIEFKCCGNKGFRDWFELQWVSNRYLDFSSKEVKDRIKSNVDGKYLIDGV 209

  Fly   181 PFACCKRSCDSCFNNFLPSEGQSIGGNSRQPFPALTVDSIN-----------------ANGC--- 225
            ||:||                     |...|.|.:.:...|                 ..||   
 Frog   210 PFSCC---------------------NPSSPRPCIQLQVTNNSAHYSYDHQTEELNLWTRGCKEA 253

  Fly   226 -LPAFVSAVWNCFYILMALWVLALKFLIVL----CCMTKFIVHRQNEGDGCDNVG 275
             |..:.|.:.:...::|.:|:|.:..:|.|    .|:...   ...|...|::.|
 Frog   254 LLTYYTSMMSSMGGMVMLVWILEMVVMIGLRFLHTCLESI---ANPEDPECESEG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 33/170 (19%)
prph2XP_002934729.1 Tetraspanin 16..181 CDD:459767 27/100 (27%)
peripherin_like_LEL 120..259 CDD:239415 33/165 (20%)

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