DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp33B and tspan33

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:XP_002931890.1 Gene:tspan33 / 100487922 XenbaseID:XB-GENE-960025 Length:282 Species:Xenopus tropicalis


Alignment Length:226 Identity:52/226 - (23%)
Similarity:84/226 - (37%) Gaps:34/226 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LILVVTAYYHTVLTGYLSDIECRLVYGYLF----GIYVFGAQVVVTFLCSIAMWRRIWRRRCTPN 85
            :::|....|..:|....:.:.|..|...|.    ||.:|    ::||...|...|.        |
 Frog    37 MVMVGIGVYARLLKHAEAAMACLAVDPALLLIGVGILMF----LITFCGCIGSLRE--------N 89

  Fly    86 IRLLLSVWAFYSCV----IIASGFGCVWNLYRGVDVLENAADTSLTRGIDMYYSCPEWKLLWDGL 146
            |.||.:   |..|:    ::....|.|..::.  |.........::..|:.|....:.:.|.|..
 Frog    90 ICLLQT---FAICLTLVFLLQLAVGIVGFIFS--DKARGKVSEIISNAIEHYRDDLDLQNLIDFG 149

  Fly   147 QWHKECCGVHGYKDW-MNAEWMPRRENNCTSMVLAPFACCKRSCDSCFNNFLPSEGQSIGGNSRQ 210
            |....|||...|||| .|..:....||........|::||....|....|.|..:|.       |
 Frog   150 QKEFSCCGGISYKDWSQNMYFNCSSENRSRERCSVPYSCCLHDEDEAVINTLCGQGM-------Q 207

  Fly   211 PFPALTVDS-INANGCLPAFVSAVWNCFYIL 240
            ....|...: |:.|||:...|:.:.:..::|
 Frog   208 ELDYLEAGAFIHTNGCIDRLVNWLHSNLFLL 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 30/126 (24%)
tspan33XP_002931890.1 Tetraspanin 21..261 CDD:459767 52/226 (23%)
penumbra_like_LEL 115..235 CDD:239411 30/128 (23%)

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