DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp33B and tspan15

DIOPT Version :10

Sequence 1:NP_523552.1 Gene:Tsp33B / 34590 FlyBaseID:FBgn0032376 Length:326 Species:Drosophila melanogaster
Sequence 2:NP_001017773.1 Gene:tspan15 / 100000710 ZFINID:ZDB-GENE-050417-295 Length:296 Species:Danio rerio


Alignment Length:279 Identity:59/279 - (21%)
Similarity:108/279 - (38%) Gaps:91/279 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YLHLLLITEA----VIGLLILVVTAYYHTVLTGYLSDIECRLVYGYLFGIYVFGAQV-------- 63
            :|...||..|    :||..||.:         |..:::| |..|..|.|:::..|.:        
Zfish    15 FLKFSLIGYATIFWLIGGFILAI---------GIYAEVE-RQRYKTLEGVFLAPAIILIVLGIIM 69

  Fly    64 -VVTFLCSIAMWRRIWRRRCTPNIRLL-LSVWAFYSCVIIASGFGCVWNLYRG--VDVLENAADT 124
             :|:|:..:|..|        .|:.|| :.::....|:::....|.|..:::.  ||:|    :.
Zfish    70 FIVSFIGVLASLR--------DNLCLLKVFLYMLALCLVLELVGGIVALIFKNQTVDIL----NK 122

  Fly   125 SLTRGIDMYYSCPEWKLLWDGLQWHKECCGVHGYKDW-MNAEWMPRRENNCTS----MVLAPFAC 184
            ::.:|:..||...::|.:.|.:|...:|||...|:|| :|      ..:||::    ...||:.|
Zfish   123 NIRKGMVNYYDDLDFKNIMDFVQKTFKCCGGTEYQDWEVN------MYHNCSAPGPLACAAPYTC 181

  Fly   185 CKRSCDSCFNNFLPSEGQSIGGNSRQPFPAL------TVDSINANGC------------------ 225
            |           :.:.|:.:  |:...:..|      ..|.|...||                  
Zfish   182 C-----------IVTPGEVV--NTMCGYKTLNKDRHENTDVIYIRGCTDAVFIWLIDNYKTMAGL 233

  Fly   226 -----LPAFVSAVWNCFYI 239
                 ||.|...::...||
Zfish   234 LLGIFLPQFFGVIFTWLYI 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp33BNP_523552.1 CD151_like_LEL 112..237 CDD:239408 32/160 (20%)
tspan15NP_001017773.1 Tetraspanin 16..>153 CDD:459767 36/158 (23%)
penumbra_like_LEL 110..227 CDD:239411 29/139 (21%)

Return to query results.
Submit another query.