DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-5 and STV1

DIOPT Version :9

Sequence 1:NP_001260388.1 Gene:Vha100-5 / 34587 FlyBaseID:FBgn0032373 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_013770.1 Gene:STV1 / 855076 SGDID:S000004658 Length:890 Species:Saccharomyces cerevisiae


Alignment Length:926 Identity:311/926 - (33%)
Similarity:470/926 - (50%) Gaps:162/926 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MFRSEKMALCQLFIQPEAAYASIAELGEKGCVQFRDLNEEVSAFQRKYVNEVRRCDDMERRLRYV 68
            :|||..|...||:|..|........||:.......|||::::||||.|||::||.|::||.:.::
Yeast     7 IFRSADMTYVQLYIPLEVIREVTFLLGKMSVFMVMDLNKDLTAFQRGYVNQLRRFDEVERMVGFL 71

  Fly    69 ESEMKK------------DEVKLPVLRPE-------EEPIA-----PNPREIVDLEAQLEKTD-- 107
            ...::|            |:....:.:|:       .||::     ...:||.|.|::..:.|  
Yeast    72 NEVVEKHAAETWKYILHIDDEGNDIAQPDMADLINTMEPLSLENVNDMVKEITDCESRARQLDES 136

  Fly   108 --------NELREM-------------------SANGASLDANFRHMQELKY----VLENTEGFF 141
                    |:|.|.                   .|....::...|.:.|.:.    :.|.....|
Yeast   137 LDSLRSKLNDLLEQRQVIFECSKFIEVNPGIAGRATNPEIEQEERDVDEFRMTPDDISETLSDAF 201

  Fly   142 S-------DQEVINLDVNRKLDPEDPANLPGAAQRGQLAFVAGVIKLERFFSFERMLWRISRGNI 199
            |       |:..:..|:.|....||.:.|....|...:  :.|.|:..:.....|:|||:.|||:
Yeast   202 SFDDETPQDRGALGNDLTRNQSVEDLSFLEQGYQHRYM--ITGSIRRTKVDILNRILWRLLRGNL 264

  Fly   200 FLRRADI-DGLVADEETGRPVLKTVFVAFFQGEQLKQRIKKVCTGYHAAVYPCPSSHAERKEMIK 263
            ..:...| :.|:..:|   .|.|..|:.|..||.|.:::|:|....:..:.   |.:....|::.
Yeast   265 IFQNFPIEEPLLEGKE---KVEKDCFIIFTHGETLLKKVKRVIDSLNGKIV---SLNTRSSELVD 323

  Fly   264 DVNVRLEDLKLVLSQSADHRSRVLNSASKHLPRWSIMVRKMKAIYHILNFFNPDVTGKCLIGEGW 328
            .:|.:::||:.:|..:.......|......||.||.|.::.|.:|..||.|..:..|  ||.|||
Yeast   324 TLNRQIDDLQRILDTTEQTLHTELLVIHDQLPVWSAMTKREKYVYTTLNKFQQESQG--LIAEGW 386

  Fly   329 VPTNDISTVQDALARASKISESSIPAFMNVIETNEMPPTYTRTNKFTNGFQNLVDSYGMASYREV 393
            ||:.::..:||:|....:...|......|||.||::||||.||||||..||::||:||:|:|:|:
Yeast   387 VPSTELIHLQDSLKDYIETLGSEYSTVFNVILTNKLPPTYHRTNKFTQAFQSIVDAYGIATYKEI 451

  Fly   394 NPALYACITFPFLFAVMFGDLGHGLILLLFASWLIIKEKQLSSI-KEEIFNIFFGGRYIIFLMGI 457
            |..|...:||||:||:||||:|||.||.|.|.:|::.|::..:: ::|||::.|.|||::.|||.
Yeast   452 NAGLATVVTFPFMFAIMFGDMGHGFILFLMALFLVLNERKFGAMHRDEIFDMAFTGRYVLLLMGA 516

  Fly   458 FSIYTGFIYNDVFSKSMNIFGSAWHMNYTRDVVEDENLKYITLRPNDTV--YKT--YPFGMDPIW 518
            ||:|||.:|||:|||||.||.|.|...             .|.|..:::  .||  ||||:|..|
Yeast   517 FSVYTGLLYNDIFSKSMTIFKSGWQWP-------------STFRKGESIEAKKTGVYPFGLDFAW 568

  Fly   519 QLADNKIIFLNTFKMKLSIIVGVIHMIFGVSMSVVNFAYYKKYASIFLEFLPQVLFLLLLFGYMV 583
            ...||.::|.|::||||||::|..||.:....|.:|:........|...|:|.::|:..:|||:.
Yeast   569 HGTDNGLLFSNSYKMKLSILMGYAHMTYSFMFSYINYRAKNSKVDIIGNFIPGLVFMQSIFGYLS 633

  Fly   584 FMMFFKWVVYNDTVEGPLSPACAPSILILFINMILQGSQDTPEPCKEFMFDGQKSIQQVFVVVAI 648
            :.:.:||  ..|.::.. .|  ||.:|.:.|||.|     .|....:.::.||..:|.|.::.|:
Yeast   634 WAIVYKW--SKDWIKDD-KP--APGLLNMLINMFL-----APGTIDDQLYSGQAKLQVVLLLAAL 688

  Fly   649 ICIPWMLLGKPLYIMIKRKTNGAPPPKPQSGGGEGHG-------EDDE----------------- 689
            :|:||:||.|||.:   |:.|      ...|||..||       |.:|                 
Yeast   689 VCVPWLLLYKPLTL---RRLN------KNGGGGRPHGYQSVGNIEHEEQIAQQRHSAEGFQGMII 744

  Fly   690 -----------------------MGEIFIHQAIHTIEYVLSTVSHTASYLRLWALSLAHAQLSEV 731
                                   .|::.|||.|||||:.|:.:||||||||||||||||||||.|
Yeast   745 SDVASVADSINESVGGGEQGPFNFGDVMIHQVIHTIEFCLNCISHTASYLRLWALSLAHAQLSSV 809

  Fly   732 LWNMVFSMGF---KYDSYIGGILIYVFFGAWALLTVGILVLIEGLSAFLHTLRLHWVEFMSKFYE 793
            ||:|..|..|   ...|.:..:.:...|..|.:|||.|||.:||.||.||.|||||||.||||:|
Yeast   810 LWDMTISNAFSSKNSGSPLAVMKVVFLFAMWFVLTVCILVFMEGTSAMLHALRLHWVEAMSKFFE 874

  Fly   794 GAGYAFEPFAFKTILD 809
            |.|||:|||:|:.|::
Yeast   875 GEGYAYEPFSFRAIIE 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-5NP_001260388.1 NtpI 5..805 CDD:224188 309/919 (34%)
V_ATPase_I 28..804 CDD:279793 301/895 (34%)
STV1NP_013770.1 V_ATPase_I 32..885 CDD:396194 301/894 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344198
Domainoid 1 1.000 584 1.000 Domainoid score I29
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 609 1.000 Inparanoid score I127
Isobase 1 0.950 - 0 Normalized mean entropy S598
OMA 1 1.010 - - QHG53812
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 1 1.000 - - mtm9226
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
TreeFam 1 0.960 - -
1413.710

Return to query results.
Submit another query.