DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-5 and VHA-A2

DIOPT Version :10

Sequence 1:NP_609515.1 Gene:Vha100-5 / 34587 FlyBaseID:FBgn0032373 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_179736.1 Gene:VHA-A2 / 816680 AraportID:AT2G21410 Length:821 Species:Arabidopsis thaliana


Alignment Length:862 Identity:341/862 - (39%)
Similarity:503/862 - (58%) Gaps:106/862 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DMFRSEKMALCQLFIQPEAAYASIAELGEKGCVQFRDLNEEVSAFQRKYVNEVRRCDDMERRLRY 67
            |:.|||.|.|.|:.:..|:|:.:::.||:.|.|||:|||.|.|.|||.|..:::||.:|.|::|:
plant    16 DLMRSEPMQLVQVIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEMARKIRF 80

  Fly    68 VESEMKKDEVKLPVLRPEEEPIAPNPREIVDLEAQLEKTDNELREMSANGASLDANFRHMQELKY 132
            .:.:|.|..|     .|:|.....|..::.|:|.:||:.:.||.|::||...|..::..:.|.|.
plant    81 FKEQMSKAGV-----TPKETLDRENDIDLDDVEVKLEELEAELVEINANNDKLQRSYNELVEYKL 140

  Fly   133 VLENTEGFFS-------------DQEVINLDV--------NRKLDPEDPANLPGAAQRGQLAFVA 176
            |||....||:             :.|.:..|:        .:.:||         .::.:|.|:.
plant   141 VLEKAGEFFASAHRSATAQQSEIETEQVGEDLLEAPLLQEEKSVDP---------TKQVKLGFLT 196

  Fly   177 GVIKLERFFSFERMLWRISRGNIFLRRADIDGLVADEETGRPVLKTVFVAFFQGEQLKQRIKKVC 241
            |::..|:...|||:|:|.:|||||:|::.|:..|.|..:|....|.|||.|:.||:.|.:|.|:|
plant   197 GLVPREKSMVFERILFRATRGNIFIRQSVIEESVVDPNSGEKAEKNVFVVFYSGERAKSKILKIC 261

  Fly   242 TGYHAAVYPCPSSHAERKEMIKDVNVRLEDLKLVLSQSADHRSRVLNSASKHLPRWSIMVRKMKA 306
            ..:.|..||......::.:|:.:|:.||.:||..:....|.|:.:|.:......:|::.:||.||
plant   262 EAFGANRYPFSEDLGKQAQMMTEVSGRLSELKTTIGAGLDQRNILLETIGDKFEQWNLKIRKEKA 326

  Fly   307 IYHILNFFNPDVTGKCLIGEGWVPTNDISTVQDALARASKISESSIPAFMNVIETNEMPPTYTRT 371
            |||.||..:.|||.|||:||||.|....:.:||||.||:..|.|.:.:...|:.|.|||||:.||
plant   327 IYHTLNMLSLDVTKKCLVGEGWSPVFAATEIQDALHRAAVDSNSQVGSIFQVLRTKEMPPTFFRT 391

  Fly   372 NKFTNGFQNLVDSYGMASYREVNPALYACITFPFLFAVMFGDLGHGLILLLFASWLIIKEKQLSS 436
            ||||..||.:||:||:|.|:|.||:::..:||||||||||||.|||:.|||...:||::||:|||
plant   392 NKFTTAFQEIVDAYGVAKYQEANPSVFTIVTFPFLFAVMFGDWGHGICLLLATMYLILREKKLSS 456

  Fly   437 IK-EEIFNIFFGGRYIIFLMGIFSIYTGFIYNDVFSKSMNIFGSAWHMNYTRDVVEDENLKYITL 500
            .| .:|..:.|||||:||:|.:||||||.|||:.||....:|.|:.:  ..|||...|......:
plant   457 QKLGDIMEMAFGGRYVIFMMSLFSIYTGLIYNEFFSIPYPLFASSAY--DCRDVSCSEATTIGLI 519

  Fly   501 RPNDTVYKTYPFGMDPIWQLADNKIIFLNTFKMKLSIIVGVIHMIFGVSMSVVNFAYYKKYASIF 565
            :..|    |||||:||:|....:::.|||:.|||:||::||..|..|:.||..|..::|...:|:
plant   520 KTRD----TYPFGVDPVWHGTRSELPFLNSLKMKMSILIGVAQMNLGIIMSFFNAKFFKSAVNIW 580

  Fly   566 LEFLPQVLFLLLLFGYMVFMMFFKWVVYNDTVEGPLSPACAPSILILF---INMILQGSQDTPEP 627
            .:|:||::||..||||:..::..||              |..|...|:   |.|.|....|..| 
plant   581 FQFVPQMIFLNCLFGYLSVLIIIKW--------------CTGSQADLYHVMIYMFLSPMDDLGE- 630

  Fly   628 CKEFMFDGQKSIQQVFVVVAIICIPWMLLGKPLYIMIKR----------------------KTNG 670
              ..:|..||.:|..|:.:|::.:|||||.|| :|:.|:                      :|| 
plant   631 --NQLFPNQKIVQLTFLFLALVSVPWMLLPKP-FILKKQHEARHQGLSYAQLDETDESLQVETN- 691

  Fly   671 APPPKPQSGGGEGHGEDDEMGEIFIHQAIHTIEYVLSTVSHTASYLRLWALSLAHAQLSEVLWNM 735
                    |||.|| |:.|..|||:||.|||||:||..||:||||||||||||||::||.|.:..
plant   692 --------GGGHGH-EEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYEK 747

  Fly   736 VFSMGFKYDS---YIGGILIYVFFGAWALLTVGILVLIEGLSAFLHTLRLHWVEFMSKFYEGAGY 797
            |..|.:.:::   :|.|||:::|      .|||:|:::|.||||||.|||||||:.:|||||.||
plant   748 VLLMAWGFNNVFIWIVGILVFIF------ATVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGY 806

  Fly   798 AFEPFAFKTILDVSEDD 814
            .|.||.|..:  .:||:
plant   807 KFAPFTFTLV--GNEDE 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-5NP_609515.1 V_ATPase_I 27..804 CDD:460232 329/826 (40%)
VHA-A2NP_179736.1 V_ATPase_I 40..813 CDD:460232 329/826 (40%)

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