DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-5 and atp6v0a1b

DIOPT Version :10

Sequence 1:NP_609515.1 Gene:Vha100-5 / 34587 FlyBaseID:FBgn0032373 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_009295518.1 Gene:atp6v0a1b / 553691 ZFINID:ZDB-GENE-050522-215 Length:868 Species:Danio rerio


Alignment Length:885 Identity:416/885 - (47%)
Similarity:582/885 - (65%) Gaps:88/885 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEKMALCQLFIQPEAAYASIAELGEKGCVQFRDLNEEVSAFQRKYVNEVRRCDDMERRL 65
            ||::||||:|.|.|||:|.||||..::||||.|.|||||||.:|:.||||:|||||||::|:|:|
Zfish     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGMVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKL 65

  Fly    66 RYVESEMKKDEVKLPVLRPEEEPIAPNPREIVDLEAQLEKTDNELREMSANGASLDANFRHMQEL 130
            |:||.|:||  ..:|.:...|.|..|.||:::||||..||.:|||:|::.|..:|..||..:.||
Zfish    66 RFVEKEIKK--ANIPTMDTGENPEVPFPRDMIDLEATFEKLENELKEINTNQEALKKNFLELTEL 128

  Fly   131 KYVLENTEGFFSDQEVINL--DVNRKLDPEDPANLPGAAQRG---QLAFVAGVIKLERFFSFERM 190
            |::|..|:.||.:.|..||  :.:..|||.:       |.||   :|.||||||..||..:||||
Zfish   129 KHILRRTQQFFDEMEDPNLLEESSSLLDPSE-------AGRGAPLRLGFVAGVINRERIPTFERM 186

  Fly   191 LWRISRGNIFLRRADIDGLVADEETGRPVLKTVFVAFFQGEQLKQRIKKVCTGYHAAVYPCPSSH 255
            |||:.|||:|||:.:|:..:.|..||..|.|:||:.||||:|||.|:||:|.|:.|::||||.:.
Zfish   187 LWRVCRGNVFLRQTEIEDPLEDPTTGDQVHKSVFIIFFQGDQLKNRVKKICEGFRASLYPCPETP 251

  Fly   256 AERKEMIKDVNVRLEDLKLVLSQSADHRSRVLNSASKHLPRWSIMVRKMKAIYHILNFFNPDVTG 320
            .|||||...||.|::||::||:|:.|||.|||.:|:|.:..|.|.|||||||||.||..|.|||.
Zfish   252 QERKEMASGVNTRIDDLQMVLNQTEDHRQRVLQAAAKTMRVWFIKVRKMKAIYHTLNLCNIDVTQ 316

  Fly   321 KCLIGEGWVPTNDISTVQDALARASKISESSIPAFMNVIETNEMPPTYTRTNKFTNGFQNLVDSY 385
            ||||.|.|.|.:|:.::|.||.|.::.|.|::|:.:|.::|.:.||||.:|||||:||||:||:|
Zfish   317 KCLIAEVWCPVSDLDSIQFALRRGTERSGSTVPSILNRMQTKQTPPTYNKTNKFTSGFQNIVDAY 381

  Fly   386 GMASYREVNPALYACITFPFLFAVMFGDLGHGLILLLFASWLIIKEKQLSSIK--EEIFNIFFGG 448
            |:.:|||:|||.|..|||||||||||||:|||:::...|.:|:::|.:|.:.|  .|:||:.|.|
Zfish   382 GIGTYREINPAPYTIITFPFLFAVMFGDMGHGVLMTSAALYLVLRETRLLAQKSDNEMFNMIFAG 446

  Fly   449 RYIIFLMGIFSIYTGFIYNDVFSKSMNIFGSAWHM--------NYTRDVVEDENLKYITLRPNDT 505
            ||||.|||:||:|||.||||.||||:|:|.|.|.:        |:|...:|..::..:....:..
Zfish   447 RYIILLMGMFSVYTGLIYNDCFSKSLNMFSSGWSVRPMFAPNGNWTDQTLESNSVLQLNPSVSGV 511

  Fly   506 VYKTYPFGMDPIWQLADNKIIFLNTFKMKLSIIVGVIHMIFGVSMSVVNFAYYKKYASIFLEFLP 570
            ....||.|:||||.:|.||:.|||:||||:|:|:|||||:|||::|:.|..|:||..:|||.|:|
Zfish   512 FGGPYPLGIDPIWNIAANKLTFLNSFKMKMSVILGVIHMLFGVTLSLFNHLYFKKPLNIFLNFIP 576

  Fly   571 QVLFLLLLFGYMVFMMFFKWVVYNDTVEGPLSPACAPSILILFINMILQGSQDTPEPCKEFMFDG 635
            :::|:..||||::.::|:||:.|:     .::...|||:||.||||.|....|   |..:.::.|
Zfish   577 EIVFMSSLFGYLILLIFYKWIAYD-----AVTSKDAPSLLIAFINMCLFNYND---PTNKPLYRG 633

  Fly   636 QKSIQQVFVVVAIICIPWMLLGKPLYI-----------------------MIKRKTNGAPPPKPQ 677
            |..||.:.||:|:.|:|.||:.|.:.:                       .:::....:||...|
Zfish   634 QAGIQSLLVVIALACVPVMLVVKTMILRRQHLWKKHLSQMRDARPAENLETLEQTGTSSPPGLTQ 698

  Fly   678 SG-------------------------------GGEGHGEDD--EMGEIFIHQAIHTIEYVLSTV 709
            .|                               .|:.|.|::  ..|::.:|||||||||.|..:
Zfish   699 QGTQKFGGVRVGNGPTEDEAEIIDHDQLSQHSEEGDEHSEEEPFNFGDMAVHQAIHTIEYCLGCI 763

  Fly   710 SHTASYLRLWALSLAHAQLSEVLWNMVFSMGFKYDSYIGGILIYVFFGAWALLTVGILVLIEGLS 774
            |:||||||||||||||||||||||.||..:|....|..|...:.:.|.|:|.|||.||:::||||
Zfish   764 SNTASYLRLWALSLAHAQLSEVLWGMVMRLGLSSRSGGGFFGLSIIFSAFATLTVCILLIMEGLS 828

  Fly   775 AFLHTLRLHWVEFMSKFYEGAGYAFEPFAFKTILDVSEDD 814
            ||||.||||||||.:|||.|.|:.|.||:|::||:...|:
Zfish   829 AFLHALRLHWVEFQNKFYTGQGFKFVPFSFESILEGRFDE 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-5NP_609515.1 V_ATPase_I 27..804 CDD:460232 396/847 (47%)
atp6v0a1bXP_009295518.1 V_ATPase_I 27..858 CDD:460232 396/847 (47%)

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