DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-5 and Atp6v0a1

DIOPT Version :9

Sequence 1:NP_001260388.1 Gene:Vha100-5 / 34587 FlyBaseID:FBgn0032373 Length:814 Species:Drosophila melanogaster
Sequence 2:XP_017452683.1 Gene:Atp6v0a1 / 29757 RGDID:68405 Length:870 Species:Rattus norvegicus


Alignment Length:883 Identity:431/883 - (48%)
Similarity:587/883 - (66%) Gaps:82/883 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEKMALCQLFIQPEAAYASIAELGEKGCVQFRDLNEEVSAFQRKYVNEVRRCDDMERRL 65
            ||::||||:|.|.|||:|.||||..::||||.|.|||||||.:|:.||||:|||||||::|:|:|
  Rat     1 MGELFRSEEMTLAQLFLQSEAAYCCVSELGELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKL 65

  Fly    66 RYVESEMKKDEVKLPVLRPEEEPIAPNPREIVDLEAQLEKTDNELREMSANGASLDANFRHMQEL 130
            |:||.|::|  ..:|::...|.|..|.||:::||||..||.:|||:|::.|..:|..||..:.||
  Rat    66 RFVEKEIRK--ANIPIMDTGENPEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTEL 128

  Fly   131 KYVLENTEGFFSDQEVINLDVNRKLDP---EDPANL--PGAAQRG---QLAFVAGVIKLERFFSF 187
            |::|..|:.||.:.|   |...:..||   |:.::|  |....||   :|.||||||..||..:|
  Rat   129 KFILRKTQQFFDEAE---LHHQQMADPDLLEESSSLLEPNEMGRGAPLRLGFVAGVINRERIPTF 190

  Fly   188 ERMLWRISRGNIFLRRADIDGLVADEETGRPVLKTVFVAFFQGEQLKQRIKKVCTGYHAAVYPCP 252
            ||||||:.|||:|||:|:|:..:.|..||..|.|:||:.||||:|||.|:||:|.|:.|::||||
  Rat   191 ERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEGFRASLYPCP 255

  Fly   253 SSHAERKEMIKDVNVRLEDLKLVLSQSADHRSRVLNSASKHLPRWSIMVRKMKAIYHILNFFNPD 317
            .:..|||||...||.|::||::||:|:.|||.|||.:|:|::..|.|.|||||||||.||..|.|
  Rat   256 ETPQERKEMASGVNTRIDDLQMVLNQTEDHRQRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNID 320

  Fly   318 VTGKCLIGEGWVPTNDISTVQDALARASKISESSIPAFMNVIETNEMPPTYTRTNKFTNGFQNLV 382
            ||.||||.|.|.|..|:.::|.||.|.::.|.|::|:.:|.::||:.||||.:|||||:||||:|
  Rat   321 VTQKCLIAEVWCPVTDLDSIQFALRRGTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTHGFQNIV 385

  Fly   383 DSYGMASYREVNPALYACITFPFLFAVMFGDLGHGLILLLFASWLIIKEKQLSSIK--EEIFNIF 445
            |:||:.:|||:|||.|..|||||||||||||.|||:::.|||.|::::|.::.|.|  .|:|::.
  Rat   386 DAYGIGTYREINPAPYTVITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSMV 450

  Fly   446 FGGRYIIFLMGIFSIYTGFIYNDVFSKSMNIFGSAWHM-------NYTRDVVEDENLKYITLRPN 503
            |.|||||.|||:||||||.||||.||||:|||||:|.:       |:|.:.:...::..:.....
  Rat   451 FSGRYIILLMGLFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFTIGNWTEETLLGSSVLQLNPAIP 515

  Fly   504 DTVYKTYPFGMDPIWQLADNKIIFLNTFKMKLSIIVGVIHMIFGVSMSVVNFAYYKKYASIFLEF 568
            ......||||:||||.:|.||:.|||:||||:|:|:|:|||:||||:|:.|..|:||..:|:..|
  Rat   516 GVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKPLNIYFGF 580

  Fly   569 LPQVLFLLLLFGYMVFMMFFKWVVYNDTVEGPLSPACAPSILILFINMILQGSQDTPEPCKEFMF 633
            :|:::|:..||||:|.::|:||..|:     ..|...|||:||.||||.|   ...||.....::
  Rat   581 IPEIIFMSSLFGYLVILIFYKWTAYD-----AHSSRNAPSLLIHFINMFL---FSYPESGNAMLY 637

  Fly   634 DGQKSIQQVFVVVAIICIPWMLLGKPLYI----MIKRKTNGAP-----PPKPQSGG--------- 680
            .|||.||...:|||::|:|||||.|||.:    :.|:...|.|     .|.|...|         
  Rat   638 SGQKGIQCFLIVVAMLCVPWMLLFKPLILRHQYLRKKHLEGQPVEAPVTPAPSQQGLEAAPAATG 702

  Fly   681 ---------GEG----------------HGEDDE---------MGEIFIHQAIHTIEYVLSTVSH 711
                     |.|                |.||.|         .|:..:|||||||||.|..:|:
  Rat   703 TLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDAEEPTEDEVFDFGDTMVHQAIHTIEYCLGCISN 767

  Fly   712 TASYLRLWALSLAHAQLSEVLWNMVFSMGFKYDSYIGGILIYVFFGAWALLTVGILVLIEGLSAF 776
            ||||||||||||||||||||||.||..:|....|..||:.::..|.|:|.|||.||:::||||||
  Rat   768 TASYLRLWALSLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAF 832

  Fly   777 LHTLRLHWVEFMSKFYEGAGYAFEPFAFKTILDVSEDD 814
            ||.||||||||.:|||.|.|:.|.||:|:.|.:...|:
  Rat   833 LHALRLHWVEFQNKFYTGTGFKFLPFSFEHIREGKFDE 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-5NP_001260388.1 NtpI 5..805 CDD:224188 426/868 (49%)
V_ATPase_I 28..804 CDD:279793 412/844 (49%)
Atp6v0a1XP_017452683.1 V_ATPase_I 27..860 CDD:396194 412/845 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342351
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1269
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X226
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.760

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