DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vha100-5 and vha-7

DIOPT Version :9

Sequence 1:NP_001260388.1 Gene:Vha100-5 / 34587 FlyBaseID:FBgn0032373 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_001379486.1 Gene:vha-7 / 178219 WormBaseID:WBGene00006916 Length:1210 Species:Caenorhabditis elegans


Alignment Length:909 Identity:354/909 - (38%)
Similarity:509/909 - (55%) Gaps:116/909 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MFRSEKMALCQLFIQPEAAYASIAELGEKGCVQFRDLNEEVSAFQRKYVNEVRRCDDMERRLRYV 68
            ||||:.|.|.|:.:..|||:..:||:|:.|.|||.|||.::|.:.|.:|.::|||::|||:||::
 Worm   292 MFRSDPMKLYQMILVKEAAFECVAEIGKHGNVQFVDLNAKMSLYSRTFVKQMRRCEEMERKLRFL 356

  Fly    69 ESEMKKDEVKLPVLRPEE----EPIAPNPREIVDLEAQLEKTDNELREMSANGASLDANFRHMQE 129
            |.::...:   |.|.|:.    :..||...|::.||.:|::.:.|..:::.|..:|..|....:|
 Worm   357 EKQVITCK---PGLDPKSIDYTDLSAPTQAEMIQLEHKLDQLEREFLDLNNNDYALRKNLNSSKE 418

  Fly   130 LKYVLENTEGFFS--DQEVINLDVNRKLDPED-------------PAN-----LPGAAQRGQLAF 174
            ...|:...:.||.  .:|.......|....:|             |::     .|.........|
 Worm   419 FLQVMRLVDEFFQVHKEEEAKARFERSATTDDIEMFSKSFGFGGLPSSNEMPLTPLLGSDDNAWF 483

  Fly   175 VAGVIKLERFFSFERMLWRISRGNIFLRRADIDGLVADEETGRPVLKTVFVAFFQGEQLKQRIKK 239
            ||||:.|::..||||:|||..|...|:|.:|....|.|..|..|:.|.||:.||:||.|:..::|
 Worm   484 VAGVLPLDKKESFERVLWRACRRTAFVRTSDASFTVNDPVTLEPLQKCVFIVFFKGESLRLIVEK 548

  Fly   240 VCTGYHAAVYPCPSSHAERKEMIKDVNVRLEDLKLVLSQSADHRSRVLNSASKHLPRWSIMVRKM 304
            ||.|::|..||||.|..:||..:.:...|:.||.:|:..:..||..:|...|..:|.|...::..
 Worm   549 VCDGFNATQYPCPKSSKDRKMKMSETEGRMNDLTVVIDTTQTHRYTILKDMSFEIPIWLKNIQIQ 613

  Fly   305 KAIYHILNFFNPDVTGKCLIGEGWVPTNDISTVQDALARASKISESSIPAFMNVIETNEMPPTYT 369
            |:::.::|.|..|..| .|.||.|:|..:...|:.||....|.|.:.:...:|.:.||..|||:.
 Worm   614 KSVFAVMNMFTVDTNG-FLAGECWIPAAEEDDVRQALHDGFKASGTEVEPILNELWTNAPPPTFH 677

  Fly   370 RTNKFTNGFQNLVDSYGMASYREVNPALYACITFPFLFAVMFGDLGHGLILLLFASWLIIKEKQL 434
            |||||||.||::|||||::.|.|||||.|..|||||||||||||..||.||||.|.:.|..|:::
 Worm   678 RTNKFTNVFQSIVDSYGVSQYCEVNPAPYTIITFPFLFAVMFGDAAHGAILLLAALFFIRNERKI 742

  Fly   435 SS--IKEEIFNIFFGGRYIIFLMGIFSIYTGFIYNDVFSKSMNIFGSAW---------------- 481
            .|  |::||||.|:|||||:.|||||||||||:|||.|:||.|:|||.|                
 Worm   743 ESKKIRDEIFNTFYGGRYIMMLMGIFSIYTGFLYNDAFAKSFNVFGSGWSNSYNETQLDWWIARS 807

  Fly   482 ---HMNYTRDVVEDENLKYITLRPNDTVYKTYPFGMDPIWQLADNKIIFLNTFKMKLSIIVGVIH 543
               |..|:.::|.:::.         .:.||||||:||||.:|||::.|||:.|||.|:|:|:..
 Worm   808 YRKHREYSLELVPEKSF---------DIEKTYPFGVDPIWNIADNRLSFLNSMKMKASVIIGITQ 863

  Fly   544 MIFGVSMSVVNFAYYKKYASIFLEFLPQVLFLLLLFGYMVFMMFFKWVVYN---DTVEGPLSPA- 604
            |.|||.:||:|..::|.|..|...|:|||:||..:|.|:...:..||:.::   :.|.|...|. 
 Worm   864 MTFGVFLSVLNHIHFKSYIDIISNFIPQVIFLSCIFIYLCIQIIVKWIFFSVNAENVFGFEYPGS 928

  Fly   605 -CAPSILILFINMI---------LQGSQDTPEPCK-EFMFDGQKSIQQVFVVVAIICIPWMLLGK 658
             ||||:||..|||.         |..:.:....|. .:.:..|:.::.:.:.:::.|||.||.||
 Worm   929 HCAPSLLIGLINMFMFKKRNEGYLNENGEVYSNCHLGYWYPNQRLVETILISISLACIPIMLFGK 993

  Fly   659 PLYIMI---KR------------KTNG---APPPKPQSGGGEGHGEDDE---------------- 689
            ||::..   ||            :.||   :.|..|....|....||.|                
 Worm   994 PLWVRFVTSKRHKLQENKSLKSLRRNGTTVSAPTSPVVDAGPPRFEDAELLLADELDIGEDIHHS 1058

  Fly   690 MGEIFIHQAIHTIEYVLSTVSHTASYLRLWALSLAHAQLSEVLWNMVFSMGFKYDSYIGG----- 749
            :.:||:||||||||:||..|||||||||||||||||||||||:|:||...|.....:|..     
 Worm  1059 LSDIFVHQAIHTIEFVLGCVSHTASYLRLWALSLAHAQLSEVMWHMVLIQGIHTVDHIENETIAM 1123

  Fly   750 ----ILIYVFFGAWALLTVGILVLIEGLSAFLHTLRLHWVEFMSKFYEGAGYAFEPFAFKTILD 809
                ::..|.|..:|.|::.||:::||||||||.||||||||.||||.|.|:.|..|..|..|:
 Worm  1124 CLKPVVACVAFFIFASLSLSILIMMEGLSAFLHALRLHWVEFQSKFYLGTGHPFHAFYLKESLE 1187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-5NP_001260388.1 NtpI 5..805 CDD:224188 351/902 (39%)
V_ATPase_I 28..804 CDD:279793 341/878 (39%)
vha-7NP_001379486.1 V_ATPase_I 315..1181 CDD:396194 341/878 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53812
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 1 1.000 - - FOG0000328
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100301
Panther 1 1.100 - - O PTHR11629
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X226
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.930

Return to query results.
Submit another query.