DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha100-5 and Atp6v0a2

DIOPT Version :9

Sequence 1:NP_001260388.1 Gene:Vha100-5 / 34587 FlyBaseID:FBgn0032373 Length:814 Species:Drosophila melanogaster
Sequence 2:NP_446227.2 Gene:Atp6v0a2 / 116455 RGDID:621006 Length:856 Species:Rattus norvegicus


Alignment Length:876 Identity:377/876 - (43%)
Similarity:544/876 - (62%) Gaps:85/876 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGDMFRSEKMALCQLFIQPEAAYASIAELGEKGCVQFRDLNEEVSAFQRKYVNEVRRCDDMERRL 65
            ||.:||||.|.|.|||:|...||..::.|||||.|||||||:.||:||||:|.||:||:::||.|
  Rat     1 MGSLFRSESMCLAQLFLQSGTAYECLSALGEKGLVQFRDLNQNVSSFQRKFVGEVKRCEELERIL 65

  Fly    66 RYVESEMKKDEVKLPVLRPEEEPIAPNPREIVDLEAQLEKTDNELREMSANGASLDANFRHMQEL 130
            .|:..|:.:.::.||  ..|..|.||..:.:::::.||:|.:.||||::.|...|..|...:.|.
  Rat    66 VYLVQEITRADIPLP--EGEASPPAPPVKHVLEMQEQLQKLEVELREVTKNKEKLRKNLLELVEY 128

  Fly   131 KYVLENTEGFF--------SDQEVINLDVNRKLDPEDPANLPGAAQRGQLAFVAGVIKLERFFSF 187
            .::|..|:.|.        :.:|...|:.:..||......| ||    :|.||:|:|:..:..:|
  Rat   129 THMLRVTKTFLKRNVEFEPTYEEFPALESDSLLDYSCMQRL-GA----KLGFVSGLIQQGKVEAF 188

  Fly   188 ERMLWRISRGNIFLRRADIDGLVADEETGRPVLKTVFVAFFQGEQLKQRIKKVCTGYHAAVYPCP 252
            ||||||..:|...:..|::|..:.|.|||..:...||:..|.|||:..::||:|..||..:||.|
  Rat   189 ERMLWRACKGYTIVTYAELDEALEDPETGEVIKWYVFLISFWGEQIGHKVKKICDCYHCHIYPYP 253

  Fly   253 SSHAERKEMIKDVNVRLEDLKLVLSQSADHRSRVLNSASKHLPRWSIMVRKMKAIYHILNFFNPD 317
            ::..||:|:.:.:|.|::||..||.::.|:..:||..|::.:....|.|||||||||:||..:.|
  Rat   254 NTAEERREIQEGLNTRIQDLYTVLHKTEDYLRQVLCKAAESVCSRVIQVRKMKAIYHMLNMCSFD 318

  Fly   318 VTGKCLIGEGWVPTNDISTVQDALARASKISESSIPAFMNVIETNEMPPTYTRTNKFTNGFQNLV 382
            ||.||||.|.|.|..|:..::.||...|:.|.::||:|||.|.|.|.|||..||||||.||||:|
  Rat   319 VTNKCLIAEVWCPEVDLPGLRRALEEGSRESGATIPSFMNTIPTKETPPTLIRTNKFTEGFQNIV 383

  Fly   383 DSYGMASYREVNPALYACITFPFLFAVMFGDLGHGLILLLFASWLIIKEK--QLSSIKEEIFNIF 445
            |:||:.|||||||||:..|||||||.|||||||||.::.|||..|::.|.  :||. .:||..:|
  Rat   384 DAYGVGSYREVNPALFTIITFPFLFGVMFGDLGHGFVMFLFALLLVLNENHPRLSQ-SQEILRMF 447

  Fly   446 FGGRYIIFLMGIFSIYTGFIYNDVFSKSMNIFGSAWHMN--YTRDVVEDENLKYI-----TLRPN 503
            |.||||:.|||:||:|||.||||.||||:|:|||.|:::  |:.....:|..|.:     |:|.:
  Rat   448 FDGRYILLLMGLFSVYTGLIYNDCFSKSLNLFGSGWNVSAMYSSSHSPEEQRKMVLWNDSTIRHS 512

  Fly   504 DT---------VYK-TYPFGMDPIWQLADNKIIFLNTFKMKLSIIVGVIHMIFGVSMSVVNFAYY 558
            .|         |:: .||||:||||.||.|::.|||:||||:|:|:|:.||.|||.:.:.|..::
  Rat   513 RTLQLDPNIPGVFRGPYPFGIDPIWNLATNRLTFLNSFKMKMSVILGIFHMTFGVILGIFNHLHF 577

  Fly   559 KKYASIFLEFLPQVLFLLLLFGYMVFMMFFKWVVYNDTVEGPLSPACAPSILILFINMILQGSQD 623
            :|..:|:|..:|::||:|.:|||::||:.:||:.|:......     ||||||.||||.|..|.:
  Rat   578 RKKFNIYLVSVPEILFMLCIFGYLIFMIIYKWLAYSAETSRE-----APSILIEFINMFLFPSSE 637

  Fly   624 TPEPCKEFMFDGQKSIQQVFVVVAIICIPWMLLGKPLYIM------------------------- 663
            |     ..::.||..:|:|.:.:.::.:|.:.|||||:::                         
  Rat   638 T-----HGLYPGQAHVQKVLLALTVLAVPVLFLGKPLFLLWLHNGRSCFGVSRSGYTLVRKDSEE 697

  Fly   664 ---------IKRKTNGAPPPKPQSGGGEGHGEDDEMGEIFIHQAIHTIEYVLSTVSHTASYLRLW 719
                     |:...|     :.:.|..|...|:...|||.:.||||:|||.|..:|:||||||||
  Rat   698 EVSLLGSQDIEEGNN-----RMEEGCREMTCEEFNFGEILMTQAIHSIEYCLGCISNTASYLRLW 757

  Fly   720 ALSLAHAQLSEVLWNMVFSMGFKYDSYIGGILIYVFFGAWALLTVGILVLIEGLSAFLHTLRLHW 784
            ||||||||||:|||.|:..:|.:.|:..|.:|:......:|:|||.||:::||||||||.:||||
  Rat   758 ALSLAHAQLSDVLWAMLMRVGLRVDNTYGVLLLLPVMTFFAVLTVFILLVMEGLSAFLHAIRLHW 822

  Fly   785 VEFMSKFYEGAGYAFEPFAFKTILD-VSEDD 814
            |||.:|||.|||..|.||:|..:.. .|:||
  Rat   823 VEFQNKFYVGAGTKFVPFSFSLLSSKFSKDD 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha100-5NP_001260388.1 NtpI 5..805 CDD:224188 371/860 (43%)
V_ATPase_I 28..804 CDD:279793 359/836 (43%)
Atp6v0a2NP_446227.2 NtpI 5..839 CDD:224188 369/856 (43%)
V_ATPase_I 28..839 CDD:279793 357/833 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D164762at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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