DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek2 and lingo1a

DIOPT Version :10

Sequence 1:NP_523551.1 Gene:kek2 / 34582 FlyBaseID:FBgn0015400 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_005174327.1 Gene:lingo1a / 564943 ZFINID:ZDB-GENE-080327-16 Length:615 Species:Danio rerio


Alignment Length:627 Identity:138/627 - (22%)
Similarity:222/627 - (35%) Gaps:218/627 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WIPLLALLAIT------AACPPEVCVCKWKGGKQTVECGGQQLSNLPEGMDPGTQVLNFSGNALQ 65
            |.|:|.|:..|      ..||.. |.|..:  :::|.|..::|.::|||:...|::|:.|.|.::
Zfish    16 WQPILILMLGTVLSGSATGCPSR-CECNVQ--ERSVLCHRKKLMSVPEGIPSETRLLDLSKNRIK 77

  Fly    66 VLQSERFLRM----------------------DLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELD 108
            .:..:.|...                      :|..||.:.|..|:|..|....|.||:||.:||
Zfish    78 TINPDEFSAFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLD 142

  Fly   109 LSENALQNVPSETFQD------------------------YSSLMRLSLSGNPIRELKTSAFRHL 149
            :|||.:..:....|||                        .|||.:|:|....:..:.|.||.||
Zfish   143 ISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHL 207

  Fly   150 SFLTTLELSNCQVERIENEAF-------------------------------------------- 170
            ..|.||.|.|..:..|.:.:|                                            
Zfish   208 HSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLNLTSLTITNANLTSIP 272

  Fly   171 -VGMDNLEWLR-----------LDGNRIG--------FIQG---THILPKSLHG----------- 201
             :.:.:|.:||           ::|||:.        ::.|   :.|.|.|..|           
Zfish   273 YLALRHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQELYLVGGRLSVIEPYSFRGLNYLKVLNVSS 337

  Fly   202 -------------------ISLHSNRWNCDCRLLDI--HFWLVNYNTPLAEEPKCMEPARLKGQV 245
                               ::||.|...||||||.:  ..|.:|:|   .::|.|..|..::|:.
Zfish   338 NFLTTLEESVFHSVGNLETLALHDNPLACDCRLLWVFRRRWRLNFN---RQQPTCSSPEFVQGKE 399

  Fly   246 IKS----LQREQLAC----LPEVSPQSSYTEVSEGRNMSITCLVRAIPEPKVLWLFNGQVMSNDS 302
            .|.    ||.....|    :.:..||..:  |.||..:...|.....|.|.::||...:......
Zfish   400 FKDFPDILQPNYFTCRKSRIRDRKPQQKF--VDEGTTVHFVCQADGDPTPVIMWLSPQKQFITMK 462

  Fly   303 LMDNLHMYYYIDETIGVSGAEEKRSEIFIYNVGAEDNGTFSCVGQNIAGT----------TFS-- 355
            .:..|.:  :.|.|:.|..|:            .:||||:.|:..|..|.          ::|  
Zfish   463 TIGRLTV--FPDGTLEVRYAQ------------IQDNGTYGCIASNAGGNDTALAHLHVHSYSPD 513

  Fly   356 -----NYTLRVIIKEP--PVVNE----VSFPRDYMNYIVASSAGG-GIIFVVLLCTIVV------ 402
                 |.||..|..:|  ..:||    |.||.|....|:|::.|. ..:.|||.|.:::      
Zfish   514 WPNQPNKTLAFISNQPNDNSINETRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRG 578

  Fly   403 --KCKKTSEPAKQRKKCDQVTSIAGGTDSSTGSTQDTGMGMM 442
              ..|...|.....:|.|     ||.:.|...:.:...|.|:
Zfish   579 KGNSKHNIEIEYVPRKSD-----AGMSSSGADAPRKFNMKMI 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek2NP_523551.1 LRR <34..>204 CDD:443914 59/312 (19%)
leucine-rich repeat 34..52 CDD:275380 6/17 (35%)
leucine-rich repeat 54..79 CDD:275380 6/46 (13%)
leucine-rich repeat 80..103 CDD:275380 9/22 (41%)
leucine-rich repeat 104..127 CDD:275380 9/46 (20%)
leucine-rich repeat 128..151 CDD:275380 8/22 (36%)
leucine-rich repeat 152..175 CDD:275380 7/67 (10%)
leucine-rich repeat 176..198 CDD:275380 9/43 (21%)
LRRCT 207..256 CDD:214507 17/54 (31%)
Ig_3 258..348 CDD:464046 20/89 (22%)
lingo1aXP_005174327.1 LRRNT 34..68 CDD:214470 11/36 (31%)
leucine-rich repeat 66..89 CDD:275380 5/22 (23%)
LRR <69..>279 CDD:443914 41/209 (20%)
leucine-rich repeat 90..113 CDD:275380 1/22 (5%)
leucine-rich repeat 114..137 CDD:275380 9/22 (41%)
leucine-rich repeat 138..185 CDD:275380 9/46 (20%)
leucine-rich repeat 186..209 CDD:275380 8/22 (36%)
leucine-rich repeat 210..257 CDD:275380 7/46 (15%)
leucine-rich repeat 234..256 CDD:275380 0/21 (0%)
leucine-rich repeat 258..281 CDD:275380 1/22 (5%)
leucine-rich repeat 282..305 CDD:275380 5/22 (23%)
LRR_8 305..364 CDD:404697 8/58 (14%)
leucine-rich repeat 306..329 CDD:275380 5/22 (23%)
leucine-rich repeat 330..350 CDD:275380 0/19 (0%)
PCC 334..>416 CDD:188093 20/84 (24%)
Ig 416..507 CDD:472250 22/106 (21%)
Ig strand B 435..439 CDD:409353 0/3 (0%)
Ig strand C 448..452 CDD:409353 0/3 (0%)
Ig strand E 473..477 CDD:409353 1/3 (33%)
Ig strand F 487..492 CDD:409353 2/4 (50%)
Ig strand G 500..503 CDD:409353 0/2 (0%)

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