DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek2 and lrfn2b

DIOPT Version :9

Sequence 1:NP_523551.1 Gene:kek2 / 34582 FlyBaseID:FBgn0015400 Length:894 Species:Drosophila melanogaster
Sequence 2:XP_009292765.1 Gene:lrfn2b / 558484 ZFINID:ZDB-GENE-121214-111 Length:781 Species:Danio rerio


Alignment Length:777 Identity:161/777 - (20%)
Similarity:270/777 - (34%) Gaps:205/777 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLALLAITAACPPEVCVCKWKGGKQTVECGGQQLSNLPEGMDPGTQVLNFSGNALQVLQSERFLR 74
            :|.::|:.|...|:.|.|:.........|..:.|..:|..:|..|..|...||.:..:..:.|..
Zfish    10 VLGMVAVMARACPKYCACQNLSESLGTLCPAKGLLFVPSDIDRSTVELRLGGNFILRITQQDFAN 74

  Fly    75 M----------------------DLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNV 117
            |                      ||..|:.:::..|:|..:.....|||.:|..|.|:.|.|..|
Zfish    75 MTDLVDLTLSRNTISYIQPFSFGDLETLRSLHMDNNRLTELGPDDLRGLISLQHLILNNNQLSRV 139

  Fly   118 PSETFQDYSSLMR-LSLSGNPIRELKTSAFRHLSFLTTLELSNCQVERIENEAFVGMDNLEWLRL 181
            ....|:|.::.:. |.||.|.::.|...:.|.:..|..|.|.:..::.|....||.::.|..|.|
Zfish   140 SERAFEDLAATLEDLDLSYNNLQALPWHSVRQMINLHQLSLDHNLLDYIPEGTFVDLERLARLDL 204

  Fly   182 DGNRI--------------GFIQGTHILPKSLHGISLHSNRWNCDCRLLDIHFWLVNYNTPLAEE 232
            ..||:              ..:..|...|:.  .:|:..|..:|:|.||    |....... .:.
Zfish   205 TSNRLQKLPPDPIFARAQDSEVMTTPFAPQL--SLSIGGNPLHCNCELL----WFRRLERD-DDL 262

  Fly   233 PKCMEPARLKGQVIKSLQREQLACLPEVSPQSSYTEVS-EGRNMSITCLVRAIPEPKVLWLFNGQ 296
            ..|..|..|||:...:::..:..|...:..|.::..:: ||:..|:.|.....|.|.:.|     
Zfish   263 ETCASPPGLKGRYFWNVREHEFLCEQPLITQHTHKLLALEGQTASLRCDAIGDPIPTIHW----- 322

  Fly   297 VMSNDSLMDNLHMYYYIDETIGVSGAEEKRSEIFIYNVG--------AEDNGTFSCVGQNIAGTT 353
            |...|.|:.|                   .|...:|..|        ::|:|||:|:..|:||.:
Zfish   323 VTPEDRLLGN-------------------SSRTVVYRNGTLEILITTSKDSGTFTCIAANLAGES 368

  Fly   354 FSNYTLRVIIKEPPVVN---EVSFPRDYMNYIVASS-AGGGI----------IFVVLLCTIVVK- 403
            .::..|. ||:.|.:.|   :.|.|:..::.|...| ...||          :..|.....:|: 
Zfish   369 TASVELS-IIQLPHISNGTGQASQPKSRLSDITGGSRTNKGIPKGQPEKAVSVSEVTAVAALVRW 432

  Fly   404 -CKKTSEPAK--------------------QRKKCDQVTSIAGGT-----------DSSTGSTQD 436
             ..||:...|                    ...|...:|::..||           ||:|..|..
Zfish   433 TVGKTAPKVKMFQLQYNCSDDEVLIYRMIPSSSKAFHITNLVSGTRYDLCVLAAWEDSATTLTAT 497

  Fly   437 TGMGMM---------KCASILNDGGDSMNGNPGLLLGDTLTPT------------KAANGAAGGG 480
            ..:|.:         :|.|:   .|..:.|...|::|..:..|            ||.:   |||
Zfish   498 NVVGCVEFYTRDDYTQCQSL---QGQLLGGTMILVVGGVIVATLLVFIVILMVRYKAGD---GGG 556

  Fly   481 IILGNQMKQNLLLYATPNSAQQQLQLNVNLMGTGPGSPPLL--------------------LSNG 525
            ....:::..:...|:..|..:.. |..|.|.|....|...:                    .|:|
Zfish   557 DAPVSKLSDSSETYSQTNGGRLG-QNGVPLPGPKEKSTVTMRDEVVKFKCGSLQSSSSSSSSSSG 620

  Fly   526 HGLAAAYCSPPASLRNYQEKNPDLVNDAESVKHKLKTAVSLDGAGEYETQSDCGQYEGCYQLAAA 590
            ...|.:| ||.::|.|.....|.  ....::...|....||:..|  :::..|  ..|....|||
Zfish   621 SADATSY-SPNSALANILRSAPP--KQHNNIDQLLGAFTSLELRG--QSKDLC--LSGTPSSAAA 678

  Fly   591 PHPHQGHQHPHPGHPLMGR-----------------------FAQAMTTLPRGMQLKPAPHQ 629
            |.....  .|....||:||                       |.....|:|...||:..|.:
Zfish   679 PAVSPA--GPADKEPLLGRTLDSRLSKLLMLPLDSKPKRSHSFDMGDFTVPTAQQLRSYPRR 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek2NP_523551.1 leucine-rich repeat 34..52 CDD:275380 3/17 (18%)
leucine-rich repeat 54..79 CDD:275380 8/46 (17%)
LRR_8 79..138 CDD:290566 18/59 (31%)
LRR_RI <80..187 CDD:238064 31/121 (26%)
leucine-rich repeat 80..103 CDD:275380 6/22 (27%)
leucine-rich repeat 104..127 CDD:275380 8/22 (36%)
LRR_8 126..186 CDD:290566 16/60 (27%)
leucine-rich repeat 128..151 CDD:275380 6/23 (26%)
leucine-rich repeat 152..175 CDD:275380 6/22 (27%)
leucine-rich repeat 176..198 CDD:275380 7/35 (20%)
TPKR_C2 207..256 CDD:301599 11/48 (23%)
I-set 258..361 CDD:254352 24/111 (22%)
Ig_2 263..361 CDD:290606 24/106 (23%)
lrfn2bXP_009292765.1 LRR_RI 27..>209 CDD:238064 43/181 (24%)
LRR_8 52..112 CDD:290566 10/59 (17%)
leucine-rich repeat 54..77 CDD:275380 6/22 (27%)
leucine-rich repeat 78..101 CDD:275380 2/22 (9%)
LRR_8 101..161 CDD:290566 18/59 (31%)
LRR_4 102..141 CDD:289563 12/38 (32%)
leucine-rich repeat 102..125 CDD:275380 6/22 (27%)
leucine-rich repeat 126..149 CDD:275380 8/22 (36%)
LRR_8 150..209 CDD:290566 16/58 (28%)
leucine-rich repeat 151..174 CDD:275380 6/22 (27%)
leucine-rich repeat 175..198 CDD:275380 6/22 (27%)
leucine-rich repeat 235..246 CDD:275378 2/12 (17%)
LRRCT 242..>274 CDD:214507 10/36 (28%)
I-set 289..376 CDD:254352 24/111 (22%)
Ig 303..376 CDD:299845 22/97 (23%)
fn3 418..485 CDD:278470 9/66 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6336
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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