DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek2 and lrrc4ca

DIOPT Version :10

Sequence 1:NP_523551.1 Gene:kek2 / 34582 FlyBaseID:FBgn0015400 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001018583.1 Gene:lrrc4ca / 553785 ZFINID:ZDB-GENE-050522-533 Length:647 Species:Danio rerio


Alignment Length:702 Identity:169/702 - (24%)
Similarity:256/702 - (36%) Gaps:212/702 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PIWIPLLALLAITAA-------CPPEVCVCKWKGGKQTVECGGQQLSNLPEGMDPGTQVLNFSGN 62
            |:::..|||..:..|       | |.||.|..:..|  |.|..:.|.::|:|:...|:.||...|
Zfish    26 PLFVLSLALQLLVVAGLVRAQTC-PSVCSCSNQFSK--VICTRRGLRDVPDGISTNTRYLNLQEN 87

  Fly    63 ALQVLQSERFLRMDLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETFQDYSS 127
            .:||::.:.|  ..|.:|:.:.||:|.:..|...||.||.||..|:|.:|.|..:|:..|:..|.
Zfish    88 LIQVIKVDSF--KHLRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFEYLSK 150

  Fly   128 LMRLSLSGNPIRELKTSAFRHLSFLTTLELSNC-QVERIENEAFVGMDNLEWL------------ 179
            |..|.|..|||..:.:.||..:..|..|:|... ::..|...||.|:.||.:|            
Zfish   151 LKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPN 215

  Fly   180 -----RLD-----GNRIGFIQ------------------------------------------GT 192
                 |||     ||::..|:                                          ..
Zfish   216 LIPLVRLDELEMSGNQLSIIRPGSFKGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNL 280

  Fly   193 HILPKS-------LHGISLHSNRWNCDCRLLDIHFWL---VNYNTPLAEEPKCMEPARLKGQVIK 247
            .:||..       |..:.||.|.|||:|.:|.:.:||   |..||...  .:|..|...||:.|.
Zfish   281 TLLPHDLFTPLHHLERVHLHHNPWNCNCDILWLSWWLKEMVPANTSCC--ARCSSPTSHKGRYIG 343

  Fly   248 SLQREQLAC-LPEVSPQSSYTEVSEGRNMSITCLVRAIPEPKVLWLF-NGQVMSNDSLMDNLHMY 310
            .|.:....| .|.:....:...|:||....:.|  ||.....|.|:. ||.:|:        |..
Zfish   344 ELDQNYFHCYAPVIVEPPADLNVTEGMAAELKC--RANSLTSVSWITPNGSIMT--------HGA 398

  Fly   311 YYI------DETIGVSGAEEKRSEIFIYNVGAEDNGTFSCVGQNIAGTTFSNYTLRVIIKEPPVV 369
            |.|      |.|:..:            ||..:|.||::|:..|.||.|.::.||.|...|    
Zfish   399 YKIRISVLNDGTLNFT------------NVTMQDTGTYTCMVSNSAGNTTASATLNVSSTE---- 447

  Fly   370 NEVSFPRDYMNYIVASSAGGGIIFVVLLCTIVVKCKKT----SEPAKQRKK-------------- 416
             ..||     :|..               |:.|:..:.    ..|..|:|.              
Zfish   448 -NSSF-----SYFT---------------TVTVETTEAPPDEGHPTVQQKNGPTPSSGIWETLPP 491

  Fly   417 CDQVTSIAGGTDSSTGSTQDTGMGMMKCASILNDGGDSMNGNPGLLLGDTLTPTKAANGA----- 476
            ....|:....|..||.:|..|....:...|   ||  |:|     .|.:.:..||...|.     
Zfish   492 SFTTTTTTARTPLSTKATDKTYTIPVTAQS---DG--SLN-----TLDEVMKTTKIIIGCFVAIT 546

  Fly   477 --AGGGIILGNQMK-----QNLLLYATPNSAQQQLQLNVNLMGTGPGS------PPL---LLSNG 525
              |...:|:..:|:     ||   :..|..|.:.:.::.:.|..||..      |||   .|::.
Zfish   547 LMAAVMLIIFYKMRKQHHQQN---HHAPTRAIEIINVDEDCMTGGPAMESHLALPPLDHEHLNHY 608

  Fly   526 HGLAAAYCSPPASLRNYQEKNPDLVNDAESVKHK--LKTAVSLDGAGEYETQ 575
            :....||            .:...:|...|..|:  |..|.|.|..  .|||
Zfish   609 NAYKTAY------------NHASTINSIHSSAHEPLLIRASSKDNV--QETQ 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek2NP_523551.1 LRR <34..>204 CDD:443914 58/241 (24%)
leucine-rich repeat 34..52 CDD:275380 5/17 (29%)
leucine-rich repeat 54..79 CDD:275380 8/24 (33%)
leucine-rich repeat 80..103 CDD:275380 9/22 (41%)
leucine-rich repeat 104..127 CDD:275380 7/22 (32%)
leucine-rich repeat 128..151 CDD:275380 8/22 (36%)
leucine-rich repeat 152..175 CDD:275380 7/23 (30%)
leucine-rich repeat 176..198 CDD:275380 10/85 (12%)
LRRCT 207..256 CDD:214507 17/51 (33%)
Ig_3 258..348 CDD:464046 23/96 (24%)
lrrc4caNP_001018583.1 LRRNT 48..81 CDD:214470 12/35 (34%)
LRR <77..326 CDD:443914 65/250 (26%)
leucine-rich repeat 79..102 CDD:275380 8/24 (33%)
leucine-rich repeat 103..126 CDD:275380 9/22 (41%)
leucine-rich repeat 127..150 CDD:275380 7/22 (32%)
leucine-rich repeat 151..174 CDD:275380 8/22 (36%)
leucine-rich repeat 175..199 CDD:275380 7/23 (30%)
leucine-rich repeat 200..221 CDD:275380 2/20 (10%)
leucine-rich repeat 222..245 CDD:275380 5/22 (23%)
leucine-rich repeat 246..269 CDD:275380 0/22 (0%)
leucine-rich repeat 270..291 CDD:275380 2/20 (10%)
IG_like 361..443 CDD:214653 28/103 (27%)
Ig strand B 372..376 CDD:409353 0/3 (0%)
Ig strand C 383..387 CDD:409353 1/3 (33%)
Ig strand E 409..413 CDD:409353 1/3 (33%)
Ig strand F 423..428 CDD:409353 2/4 (50%)
Ig strand G 436..439 CDD:409353 0/2 (0%)

Return to query results.
Submit another query.