DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek2 and Lrrc4c

DIOPT Version :10

Sequence 1:NP_523551.1 Gene:kek2 / 34582 FlyBaseID:FBgn0015400 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001101223.1 Gene:Lrrc4c / 311236 RGDID:1311013 Length:640 Species:Rattus norvegicus


Alignment Length:515 Identity:129/515 - (25%)
Similarity:194/515 - (37%) Gaps:145/515 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PIWIPLLALLAITAA-------CPPEVCVCKWKGGKQTVECGGQQLSNLPEGMDPGTQVLNFSGN 62
            |:.:.||||..:..|       | |.||.|..:..|  |.|..:.|..:|:|:...|::||...|
  Rat    25 PLLVVLLALQLLVVAGLVRAQTC-PSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHEN 86

  Fly    63 ALQVLQSERFLRMDLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETFQDYSS 127
            .:|:::...|  ..|.:|:.:.||||.:..|...||.||.||..|:|.:|.|..:|:..|...|.
  Rat    87 QIQIIKVNSF--KHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149

  Fly   128 LMRLSLSGNPIRELKTSAFRHLSFLTTLELSNC-QVERIENEAFVGMDNLEWLR----------- 180
            |..|.|..|||..:.:.||..:..|..|:|... ::..|...||.|:.||.:|.           
  Rat   150 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPN 214

  Fly   181 -----------LDGN-----RIGFIQGTHILPK-------------------------------- 197
                       |.||     |.|..||...|.|                                
  Rat   215 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 279

  Fly   198 ------------SLHGISLHSNRWNCDCRLLDIHFWLVNY---NTPLAEEPKCMEPARLKGQVIK 247
                        .|..|.||.|.|||:|.:|.:.:|:.:.   ||...  .:|..|..|||:.|.
  Rat   280 TLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIRDMAPSNTACC--ARCNTPPNLKGRYIG 342

  Fly   248 SLQREQLAC-LPEVSPQSSYTEVSEGRNMSITCLVRAIPE-PKVLWLF-NGQVMSNDSLMDNLHM 309
            .|.:....| .|.:....:...|:||....:.|  ||... ..|.|:. ||.||::.:.  .:.:
  Rat   343 ELDQNYFTCYAPVIVEPPADLNVTEGMAAELKC--RASTSLTSVSWITPNGTVMTHGAY--KVRI 403

  Fly   310 YYYIDETIGVSGAEEKRSEIFIYNVGAEDNGTFSCVGQNIAGTTFSNYTLRVIIKEPPVVNEVSF 374
            ....|.|:..:            ||..:|.|.::|:..|..|.|.::.||.       |....:.
  Rat   404 AVLSDGTLNFT------------NVTVQDTGMYTCMVSNSVGNTTASATLN-------VTAATTT 449

  Fly   375 PRDYMNYIVASSAGGGIIFVVLLCTIVVKCKKTSEPAKQRKKCDQVTSIAGGTDSSTGST 434
            |..|.:                  |:.|   :|.||::..         |..||::.|.|
  Rat   450 PFSYFS------------------TVTV---ETMEPSQDE---------ARTTDNNVGPT 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek2NP_523551.1 LRR <34..>204 CDD:443914 60/241 (25%)
leucine-rich repeat 34..52 CDD:275380 5/17 (29%)
leucine-rich repeat 54..79 CDD:275380 7/24 (29%)
leucine-rich repeat 80..103 CDD:275380 10/22 (45%)
leucine-rich repeat 104..127 CDD:275380 7/22 (32%)
leucine-rich repeat 128..151 CDD:275380 8/22 (36%)
leucine-rich repeat 152..175 CDD:275380 7/23 (30%)
leucine-rich repeat 176..198 CDD:275380 11/92 (12%)
LRRCT 207..256 CDD:214507 16/51 (31%)
Ig_3 258..348 CDD:464046 20/91 (22%)
Lrrc4cNP_001101223.1 LRRNT 47..80 CDD:214470 12/35 (34%)
LRR <76..325 CDD:443914 65/250 (26%)
leucine-rich repeat 78..101 CDD:275380 7/24 (29%)
leucine-rich repeat 102..125 CDD:275380 10/22 (45%)
leucine-rich repeat 126..149 CDD:275380 7/22 (32%)
leucine-rich repeat 150..173 CDD:275380 8/22 (36%)
leucine-rich repeat 174..198 CDD:275380 7/23 (30%)
leucine-rich repeat 199..220 CDD:275380 2/20 (10%)
leucine-rich repeat 221..244 CDD:275380 7/22 (32%)
leucine-rich repeat 245..268 CDD:275380 2/22 (9%)
leucine-rich repeat 269..290 CDD:275380 0/20 (0%)
IG_like 360..443 CDD:214653 24/105 (23%)
Ig strand B 371..375 CDD:409390 0/3 (0%)
Ig strand C 383..387 CDD:409390 1/3 (33%)
Ig strand E 409..413 CDD:409390 1/3 (33%)
Ig strand F 423..428 CDD:409390 1/4 (25%)
Ig strand G 436..439 CDD:409390 0/2 (0%)

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