DRSC/TRiP Functional Genomics Resources

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Protein Alignment kek2 and Lrrc4b

DIOPT Version :9

Sequence 1:NP_523551.1 Gene:kek2 / 34582 FlyBaseID:FBgn0015400 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001258010.1 Gene:Lrrc4b / 308571 RGDID:1307121 Length:709 Species:Rattus norvegicus


Alignment Length:583 Identity:142/583 - (24%)
Similarity:218/583 - (37%) Gaps:181/583 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPIWI---PLLA---LLAITAA----------CPPEVCVCKWKGGKQTVECGGQQLSNLPEGMDP 52
            |.:|:   ||.|   .:|:|:|          | |..|.|..:..:  |.|..::|:.:|..:..
  Rat    27 LLLWLFSPPLRAGGGGVAVTSAAGGGSPPATSC-PAACSCSNQASR--VICTRRELAEVPASIPV 88

  Fly    53 GTQVLNFSGNALQVLQSERFLRMDLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNV 117
            .|:.||...|::||::::.|  ..|.:|:.:.||:|.:.:|...||.||.:|..|:|.:|.|..|
  Rat    89 NTRYLNLQENSIQVIRTDTF--KHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 151

  Fly   118 PSETFQDYSSLMRLSLSGNPIRELKTSAFRHLSFLTTLELSNC-QVERIENEAFVGMDN------ 175
            |::.|:..|.|..|.|..|||..:.:.||..:..|..|:|... ::|.|...||.|:.|      
  Rat   152 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 216

  Fly   176 ----------------LEWLRLDGNRI-----GFIQGTHILPK---------------------- 197
                            ||.|.|.|||:     |..||...|.|                      
  Rat   217 GMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSL 281

  Fly   198 ----------------------SLHGISLHSNRWNCDCRLLDIHFWL---VNYNTPLAEEPKCME 237
                                  .|..:.|:.|.|:|:|.:|.:.:||   |..||...  .:|..
  Rat   282 EELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCC--ARCHA 344

  Fly   238 PARLKGQVIKSLQREQLAC-LPEVSPQSSYTEVSEGRNMSITCLVRAIPEPKVLWLF-NGQVMSN 300
            ||.|||:.|..|.:....| .|.:....:...|:||....:.|.. ......|.||. ||.:|::
  Rat   345 PAGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRT-GTSMTSVNWLTPNGTLMTH 408

  Fly   301 DSLMDNLHMYYYIDETIGVSGAEEKRSEIFIYNVGAEDNGTFSCVGQNIAGTTFSNYTLRVIIKE 365
            .|....:.:.:  |.|:..:            ||..:|.|.::|:..|.||.|.::.||.|...:
  Rat   409 GSYRVRISVLH--DGTLNFT------------NVTVQDTGQYTCMVTNSAGNTTASATLNVSAVD 459

  Fly   366 PPVVNEVSFPRDYMNYIVASSAGGG--------------IIFVVLLCTIVVKCKKT--SEPAKQR 414
            |               :.|...|||              ..|.    |:.|:..:|  .|.|:|.
  Rat   460 P---------------VAAGGPGGGGPGGGGGAGGAGGYTYFT----TVTVETLETQPGEEAQQP 505

  Fly   415 KKCDQVTSIAGGTDSS-TGSTQDTGMGMMKCASILNDGGDSMNGNPGLLLGDTLTPTKAANGA 476
            :          ||:.. .|.|.|...|               .|.|     |...|..|:..|
  Rat   506 R----------GTEKEPPGPTTDGAWG---------------GGRP-----DAAAPASASTTA 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek2NP_523551.1 leucine-rich repeat 34..52 CDD:275380 4/17 (24%)
leucine-rich repeat 54..79 CDD:275380 8/24 (33%)
LRR_8 79..138 CDD:290566 22/58 (38%)
LRR_RI <80..187 CDD:238064 42/134 (31%)
leucine-rich repeat 80..103 CDD:275380 9/22 (41%)
leucine-rich repeat 104..127 CDD:275380 8/22 (36%)
LRR_8 126..186 CDD:290566 24/82 (29%)
leucine-rich repeat 128..151 CDD:275380 8/22 (36%)
leucine-rich repeat 152..175 CDD:275380 8/23 (35%)
leucine-rich repeat 176..198 CDD:275380 12/70 (17%)
TPKR_C2 207..256 CDD:301599 18/51 (35%)
I-set 258..361 CDD:254352 25/103 (24%)
Ig_2 263..361 CDD:290606 24/98 (24%)
Lrrc4bNP_001258010.1 LRRNT 59..92 CDD:214470 9/35 (26%)
LRR <89..299 CDD:227223 55/211 (26%)
LRR 1 89..110 7/22 (32%)
leucine-rich repeat 90..113 CDD:275380 8/24 (33%)
LRR 2 113..134 7/20 (35%)
leucine-rich repeat 114..137 CDD:275380 9/22 (41%)
LRR 3 137..158 8/20 (40%)
leucine-rich repeat 138..161 CDD:275380 8/22 (36%)
LRR 4 161..182 8/20 (40%)
leucine-rich repeat 162..185 CDD:275380 8/22 (36%)
LRR 5 185..207 7/21 (33%)
leucine-rich repeat 186..210 CDD:275380 8/23 (35%)
LRR 6 210..231 1/20 (5%)
leucine-rich repeat 211..232 CDD:275380 0/20 (0%)
LRR 7 232..253 8/20 (40%)
leucine-rich repeat 233..256 CDD:275380 10/22 (45%)
LRR 8 256..277 2/20 (10%)
leucine-rich repeat 257..280 CDD:275380 2/22 (9%)
LRR 9 280..301 0/20 (0%)
leucine-rich repeat 281..302 CDD:275380 0/20 (0%)
LRRCT 313..363 CDD:214507 18/51 (35%)
I-set 366..455 CDD:400151 25/103 (24%)
Ig strand A 366..369 CDD:409353 1/2 (50%)
Ig strand A' 373..376 CDD:409353 0/2 (0%)
Ig strand B 382..389 CDD:409353 1/6 (17%)
Ig strand C 395..400 CDD:409353 2/4 (50%)
Ig strand C' 403..405 CDD:409353 1/1 (100%)
Ig strand D 414..418 CDD:409353 0/3 (0%)
Ig strand E 421..425 CDD:409353 1/3 (33%)
Ig strand F 435..442 CDD:409353 1/6 (17%)
Ig strand G 445..455 CDD:409353 4/9 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..552 16/73 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46071
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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