DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kek2 and Slitrk4

DIOPT Version :9

Sequence 1:NP_523551.1 Gene:kek2 / 34582 FlyBaseID:FBgn0015400 Length:894 Species:Drosophila melanogaster
Sequence 2:NP_001352040.1 Gene:Slitrk4 / 245446 MGIID:2442509 Length:837 Species:Mus musculus


Alignment Length:334 Identity:87/334 - (26%)
Similarity:149/334 - (44%) Gaps:46/334 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IWIPLL--ALLAITAA---CPPEVC-VCKWKGGKQTVECGGQQLS-NLPEGMDP---GTQVLNFS 60
            :|:.|:  ||::.|.|   ...|:| ||.....:..:....:::| ..|..:.|   ....|||.
Mouse     3 LWLFLIVSALISSTNADSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFYHLNFQ 67

  Fly    61 GNALQVLQSERFLRMDLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETFQDY 125
            .|.|.:|....|:...  :...::|..|:|..|...||.||:.|.:|.|:.|.|:.:.::||...
Mouse    68 NNFLNILYPNTFVNFS--HAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGI 130

  Fly   126 SSLMRLSLSGNPIRELKTSAFRHLSFLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNR----- 185
            .:|..|....|.|:.::..||..|..|..|.|::..:..:.:..| ...:|..|.:.|||     
Mouse   131 ENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF-RFASLTHLDIRGNRIQKLP 194

  Fly   186 -IGFIQGTHILPKSLHGISLHSNRWNCDCRLLDIHFWLVN--YNTPLAEEPKCMEPARLKGQVIK 247
             ||.::  ||  ..:..:.|..|.|||.|.||.:..||.|  ||..:. |..|..|:.|.|:::|
Mouse   195 YIGVLE--HI--GRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIG-EAICETPSDLYGRLLK 254

  Fly   248 SLQREQLA-----------CLPEVSPQSSYTEVSEGRNMSITCLVRAIPEP-------KVLWLFN 294
            ...:::|.           .||....::.:|  :...:.:.|.|.|.:.:|       |:..:..
Mouse   255 ETNKQELCPMGTGSDFDVRILPPSQQENGFT--TPNGHTTQTTLHRLVTKPPKTTNPSKISGIVA 317

  Fly   295 GQVMSNDSL 303
            |:.:||.:|
Mouse   318 GKALSNRNL 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kek2NP_523551.1 leucine-rich repeat 34..52 CDD:275380 2/18 (11%)
leucine-rich repeat 54..79 CDD:275380 7/24 (29%)
LRR_8 79..138 CDD:290566 18/58 (31%)
LRR_RI <80..187 CDD:238064 31/112 (28%)
leucine-rich repeat 80..103 CDD:275380 8/22 (36%)
leucine-rich repeat 104..127 CDD:275380 7/22 (32%)
LRR_8 126..186 CDD:290566 16/65 (25%)
leucine-rich repeat 128..151 CDD:275380 7/22 (32%)
leucine-rich repeat 152..175 CDD:275380 4/22 (18%)
leucine-rich repeat 176..198 CDD:275380 9/27 (33%)
TPKR_C2 207..256 CDD:301599 19/61 (31%)
I-set 258..361 CDD:254352 11/53 (21%)
Ig_2 263..361 CDD:290606 10/48 (21%)
Slitrk4NP_001352040.1 internalin_A <15..>253 CDD:380193 69/245 (28%)
LRR 1 60..81 7/20 (35%)
leucine-rich repeat 63..84 CDD:275380 7/22 (32%)
LRR_8 83..143 CDD:404697 18/61 (30%)
LRR 2 84..105 6/20 (30%)
leucine-rich repeat 85..108 CDD:275380 8/22 (36%)
LRR 3 108..129 7/20 (35%)
leucine-rich repeat 109..132 CDD:275380 7/22 (32%)
LRR 4 132..153 6/20 (30%)
leucine-rich repeat 133..156 CDD:275380 7/22 (32%)
LRR 5 156..177 4/21 (19%)
leucine-rich repeat 157..182 CDD:275380 5/25 (20%)
LRR 6 179..200 7/20 (35%)
leucine-rich repeat 183..325 CDD:275380 39/148 (26%)
leucine-rich repeat 326..402 CDD:275380 1/1 (100%)
leucine-rich repeat 358..378 CDD:275380
PPP1R42 359..>550 CDD:411060
LRR 7 378..399
LRR_8 402..461 CDD:404697
LRR 8 402..423
leucine-rich repeat 403..426 CDD:275380
LRR 9 426..447
leucine-rich repeat 427..450 CDD:275380
LRR 10 450..471
leucine-rich repeat 451..472 CDD:275380
LRR 11 474..495
leucine-rich repeat 475..496 CDD:275380
LRR 12 497..518
leucine-rich repeat 498..522 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I4837
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.