DRSC/TRiP Functional Genomics Resources

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Protein Alignment spag4 and Spag4

DIOPT Version :10

Sequence 1:NP_609510.2 Gene:spag4 / 34581 FlyBaseID:FBgn0032368 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_113980.1 Gene:Spag4 / 83623 RGDID:620151 Length:444 Species:Rattus norvegicus


Alignment Length:220 Identity:57/220 - (25%)
Similarity:103/220 - (46%) Gaps:27/220 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 RKIGHLMDDVYNLKKQVMSADCSSKSAQSTPKPESVA-LAKPRIN--------YASEELGARIIN 126
            :::..|..::..|.|:|.|.    ::|.|    |.|| |...|:|        ||...:||. |:
  Rat   216 QQLQQLQAELSKLHKEVTSV----RAAHS----ERVAKLVFQRLNEDFVRKPDYALSSVGAS-ID 271

  Fly   127 VKAHSID----GTNIIRSLLGLDFSTNPPVNMIRTGLSPGSCFGFNGSRATVTLHLARTIIVEAI 187
            ::..|.|    .|....:.|.......||..::...:.||:|:.|.|.:..|.:.|...:.:..|
  Rat   272 LEKTSSDYEDRNTAYFWNRLSFWNYARPPSVILEPDVFPGNCWAFEGEQGQVVIRLPGHVQLSDI 336

  Fly   188 TLTHVAREMTPDLCVKSAPKNFDVYGLRSENSKREL-LGQWSYDNAANKRTQSYSVRSD--TFFR 249
            ||.|....:.......|||::|.|:||::::.:.|: ||::.:: ......|::.:::|  :.|.
  Rat   337 TLQHPPPTVAHTGGASSAPRDFAVFGLQADDDETEVFLGKFIFE-VQKSEIQTFHLQNDPPSAFP 400

  Fly   250 NLDFSFNSNHG-ANSTCIYRVEVYG 273
            .:.....||.| ...||:|||..:|
  Rat   401 KVKIQILSNWGHPRFTCLYRVRAHG 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spag4NP_609510.2 Sad1_UNC 148..274 CDD:400199 35/130 (27%)
Spag4NP_113980.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109
Sad1_UNC 293..426 CDD:400199 35/134 (26%)
Blue background indicates that the domain is not in the aligned region.

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