DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spag4 and unc-84

DIOPT Version :10

Sequence 1:NP_609510.2 Gene:spag4 / 34581 FlyBaseID:FBgn0032368 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_001024707.1 Gene:unc-84 / 181480 WormBaseID:WBGene00006816 Length:1111 Species:Caenorhabditis elegans


Alignment Length:179 Identity:46/179 - (25%)
Similarity:85/179 - (47%) Gaps:21/179 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 RINYASEELGARIINVKAHSIDGTNIIRSLLGLD---------FSTNPPVNMIRT--GLSPGSCF 165
            :::||.|..|..:::.:.     :...:|...|:         |..:|.|.:.|.  .|.||.|:
 Worm   936 KVDYALESSGGAVVSTRC-----SETYKSYTRLEKFWDIPIYYFHYSPRVVIQRNSKSLFPGECW 995

  Fly   166 GFNGSRATVTLHLARTIIVEAITLTHVAREMTPDLCVKSAPKNFDVYGLR--SENSKRELLGQWS 228
            .|..||..:.:.|:..|.|.:|:..|:..|:.|:....||||...|:..:  .:.:.|.|:|.::
 Worm   996 CFKESRGYIAVELSHFIDVSSISYEHIGSEVAPEGNRSSAPKGVLVWAYKQIDDLNSRVLIGDYT 1060

  Fly   229 YDNAANKRTQSYSVRSDTFF--RNLDFSFNSNHGANSTCIYRVEVYGRL 275
            || ......|.:..:....|  :.::....||:||..||:||:.|:|::
 Worm  1061 YD-LDGPPLQFFLAKHKPDFPVKFVELEVTSNYGAPFTCLYRLRVHGKV 1108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spag4NP_609510.2 Sad1_UNC 148..274 CDD:400199 38/131 (29%)
unc-84NP_001024707.1 COG5412 <676..>802 CDD:444167
Sad1_UNC 972..1108 CDD:400199 40/136 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.