DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dlg5 and Pals2

DIOPT Version :9

Sequence 1:NP_609505.1 Gene:Dlg5 / 34573 FlyBaseID:FBgn0032363 Length:1916 Species:Drosophila melanogaster
Sequence 2:XP_006236558.1 Gene:Pals2 / 362359 RGDID:1311833 Length:554 Species:Rattus norvegicus


Alignment Length:498 Identity:96/498 - (19%)
Similarity:196/498 - (39%) Gaps:104/498 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1474 STVYDEEP-KPSLPPPPAS---VPAETLRYVTLHMDKSKNLGIKLFGGNKVGIYVHDVAVGSPSD 1534
            |..|:..| .|.:..|..:   :|.:.:|.:.:|....:.||: .|......:.:..:..|...|
  Rat   101 SKCYESPPSSPEMNIPSLNNQLLPVDAIRILGIHKRAGEPLGV-TFRVENNDLVIARILHGGMID 164

  Fly  1535 HAG-IRKGDQILEYNGVDLSGVTAEQAANEISKLTDTVTMLVQNKLHTLKQIKD--EPGDSF--- 1593
            ..| :..||.|.|.||.:: |...::....:..::.:||:.:      |...:|  .|..|:   
  Rat   165 RQGLLHVGDIIKEVNGHEV-GNNPKELQELLKNISGSVTLKI------LPSYRDTIAPQQSYVNM 222

  Fly  1594 ----------YIRVGFDRTG------ELNEDDLRFVKDEVLYVDNTVFNGTFGLWRAWKLDAMGH 1642
                      :::..||...      ...|..|:|.|.|:|.:.|   ......|:|      .|
  Rat   223 ERHPAHVRQVFVKCHFDYNPFNDNLIPCKEAGLKFSKGEILQIVN---REDPNWWQA------SH 278

  Fly  1643 RKE---CGIIPSQMKVEEELRSGEVVDCDTGTARRGSTSARRSFFRRKKNQRSSSRDSTEIASFS 1704
            .||   .|:||||. :||:.::....|.|......|:.|.:    ::||....::|:    |.|.
  Rat   279 VKEGGSAGLIPSQF-LEEKRKAFVRRDWDNSGPFCGTISNK----KKKKMMYLTTRN----AEFD 334

  Fly  1705 NTQLSFFPDLGLLNDDGGALSYQRVELL--------DSPIRRPVLIIGPLSECLMVRLTIDFSN- 1760
            ..::..:.::..:.      .:||..|:        ...::...:::.|    .....|:.|:: 
  Rat   335 RHEIQIYEEVAKMP------PFQRKTLVLIGAQGVGRRSLKNRFIVLNP----ARFGTTVPFTSR 389

  Fly  1761 ----------LFKLCEVTAMDCSQEAMEEGLKENIFVDYRRRGNKFECTTVEAISNACKNDRRHC 1815
                      .:|.       .|:..||..:|...::::.........|.:.:|.:..:..|. |
  Rat   390 KPREDEKDGQAYKF-------VSRSEMEADIKAGKYLEHGEYEGNLYGTKIGSILDVVQTGRT-C 446

  Fly  1816 ILDVSISAVERLQRLQIYPIVLLLRFKSAKQIRDIR-------DFG--TDKISAKAAKEMYERAM 1871
            ||||:..|::.|:..:..|.|:   |.:|.::..:|       |.|  |..::....|:..:.:.
  Rat   447 ILDVNPQALKVLRTSEFMPYVV---FIAAPELETLRAMHKAVVDAGITTKLLTDSDLKKTVDESA 508

  Fly  1872 KLETDYKQYISAVIPGVSIKHMCTQIKDAVDKEQDKLLWVPVS 1914
            :::..|..|...:|...::......::.|::|.:.:..|||:|
  Rat   509 RIQRAYNHYFDLIIVNDNLDKAFENLQTAIEKLRTEPQWVPIS 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlg5NP_609505.1 AAA_23 <165..333 CDD:290211
CENP-F_leu_zip 229..360 CDD:287450
DUF1090 <326..408 CDD:284007
PDZ_signaling 439..516 CDD:238492
PDZ_signaling 533..592 CDD:238492
PDZ_signaling 1290..1369 CDD:238492
PDZ_signaling 1497..1576 CDD:238492 17/79 (22%)
SH3_DLG5 1594..1657 CDD:212794 19/71 (27%)
Guanylate_kin 1737..1904 CDD:279019 31/186 (17%)
NK <1773..1905 CDD:302627 28/140 (20%)
Pals2XP_006236558.1 L27 2..55 CDD:197794
L27 57..108 CDD:397114 2/6 (33%)
PDZ_signaling 133..206 CDD:238492 16/80 (20%)
SH3_MPP6 233..293 CDD:212971 19/69 (28%)
Guanylate_kin 351..541 CDD:395500 34/204 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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