DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dlg5 and Lnx1

DIOPT Version :9

Sequence 1:NP_609505.1 Gene:Dlg5 / 34573 FlyBaseID:FBgn0032363 Length:1916 Species:Drosophila melanogaster
Sequence 2:NP_001101828.1 Gene:Lnx1 / 360926 RGDID:1308159 Length:728 Species:Rattus norvegicus


Alignment Length:555 Identity:110/555 - (19%)
Similarity:178/555 - (32%) Gaps:184/555 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1151 GAIYEGGTFPRKKDNQ---------RLRIPSNPSVASKSSSMVKNSSGSIDHHYVTS-------- 1198
            ||.:.|.|..||:.:|         ......:|.|::.::..:......:|:...||        
  Rat   134 GASHYGLTKDRKRRSQDGCPDGCASLTATTLSPEVSAAATISLMTDEPGLDNPAYTSSVEDGEPV 198

  Fly  1199 TGPVSGGSMSASSSDRAPMSLMSSSIHNSYGANIAGGNGTGSSIGVGGGGGGGSGRGSPMPQVHV 1263
            |.|...|..:.:.:.....|.|.|.........::....|.|          ||.          
  Rat   199 TNPSDTGRSNRTRARPFERSTMRSRSFKKINRALSALRRTKS----------GSA---------- 243

  Fly  1264 EVLSHGG-GGSGKRNSNVPADF-----LCP-GDLRRVTIDKRDKSLGITIQCNNNGGG------I 1315
             |.:|.. |.....|..||..|     |.| |::..:.|::.|.:..::|:.  .||.      |
  Rat   244 -VANHADQGRDNSENDTVPEVFPRLFHLIPDGEITSIKINRVDPNESLSIRL--VGGSETPLVHI 305

  Fly  1316 FVSTVADKSTAMRAG-LQVGDQLLEVCGINMRAATQEIAANVLRQ-CGDSFTMLVQYNPEKFPSI 1378
            .:..:.......|.| |..||.:|:|.|:::.......|..:||| |  ....|.....:||.| 
  Rat   306 IIQHIYRDGVIARDGRLLPGDIILKVNGMDISNVPHNYAVRLLRQPC--QVLRLTVLREQKFRS- 367

  Fly  1379 EYEGAHNLEPESPINHSGSPTPRNSPRPPARNSLFPLPMQPQAPSTR------------------ 1425
                           .|.:|.| :|..|  |:..|.:.:...:|..:                  
  Rat   368 ---------------RSNAPAP-DSYGP--RDDSFHVILNKSSPEEQLGIKLVRRVDEPGVFIFN 414

  Fly  1426 -------------------------------PGSRAPLSHQSIK----------DQSFTDSLENQ 1449
                                           |.|.|.|...|.:          .|...|..:..
  Rat   415 VLNGGVADRHGQLEENDRVLAINGHDLRFGSPESAAHLIQASERRVHLVVSRQVRQPSPDIFQEA 479

  Fly  1450 SDISSSQDMPSSAATTTTTTASATSTVYDEEPKPSLPPPPASVPAETL--RYVTLHMDKSKNLGI 1512
            ..||:.|..|.|...:|                       :|.||.|.  :.|::..|.:::||:
  Rat   480 GCISNGQQSPVSGERST-----------------------SSKPAATCHEKVVSVQKDPNESLGM 521

  Fly  1513 KLFGGNK-----VGIYVHDVAVGSPSDHAG-IRKGDQILEYNGVDLSGVTAEQAANEISKLTDTV 1571
            .:.||..     :.|||..|..|......| |:.||.:|..||::|:.|:..:|   ::.|..|.
  Rat   522 TVGGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVNGIELTEVSRTEA---VAILKSTP 583

  Fly  1572 TMLVQNKLHTLKQIKDE---------------PGD 1591
            :.:|...|...:|...|               |||
  Rat   584 SSVVLKALEVKEQETQEDCSPAALDSNHNVTPPGD 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlg5NP_609505.1 AAA_23 <165..333 CDD:290211
CENP-F_leu_zip 229..360 CDD:287450
DUF1090 <326..408 CDD:284007
PDZ_signaling 439..516 CDD:238492
PDZ_signaling 533..592 CDD:238492
PDZ_signaling 1290..1369 CDD:238492 20/86 (23%)
PDZ_signaling 1497..1576 CDD:238492 23/86 (27%)
SH3_DLG5 1594..1657 CDD:212794
Guanylate_kin 1737..1904 CDD:279019
NK <1773..1905 CDD:302627
Lnx1NP_001101828.1 RING 45..81 CDD:214546
DegQ <260..364 CDD:223343 26/107 (24%)
PDZ_signaling 276..360 CDD:238492 20/87 (23%)
PDZ_signaling 384..464 CDD:238492 7/79 (9%)
PDZ_signaling 506..589 CDD:238492 24/85 (28%)
PDZ_signaling 637..721 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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