DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dlg5 and Lnx2

DIOPT Version :9

Sequence 1:NP_609505.1 Gene:Dlg5 / 34573 FlyBaseID:FBgn0032363 Length:1916 Species:Drosophila melanogaster
Sequence 2:NP_001101799.1 Gene:Lnx2 / 360761 RGDID:1308222 Length:686 Species:Rattus norvegicus


Alignment Length:577 Identity:116/577 - (20%)
Similarity:192/577 - (33%) Gaps:206/577 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1053 HTQLFPTFG------PGGR-----------GNRRSSPLTLPSPPPQQQLQQLPA--ATAPHDSVG 1098
            |||:....|      ||..           |.|.|:|..||.......|.. ||  .:|..|||.
  Rat   157 HTQIEGETGSTVIDPPGPSPPETDCLGTVPGERNSTPAPLPVWTEDPGLDN-PAFEESAAADSVQ 220

  Fly  1099 IPTDLDYHPHHHTQTNAMPHPHPHPHAPYLDYGHGLGIGPYMGVGGG----VSGVGGAIYEGGTF 1159
            .|..|   |.....|..:     |...||:..|..:       |||.    ::.|...:|..|..
  Rat   221 QPLSL---PEGEITTIEI-----HRTNPYIQLGISI-------VGGNETPLINIVIQEVYRDGAI 270

  Fly  1160 PRKKDNQRLRIPSNPSVASKSSSMVKNSSGSIDHHYVTSTGPVSGGSMSASSSDRAPMSLMSSSI 1224
            .|..     |:.:...:...::..:.|    :.|:|.                 ||.:|      
  Rat   271 ARDG-----RLLAGDQILQVNNCDISN----VSHNYA-----------------RAVLS------ 303

  Fly  1225 HNSYGANIAGGNGTGSSIGVGGGGGGGSGRGSPMPQVHVEVLSHGGGGSGKRNSNVPADFLCPGD 1289
                                           .|...:|:.||.....||   .:|..||...|.|
  Rat   304 -------------------------------QPCSTLHLTVLRERRFGS---RANNHADGSAPRD 334

  Fly  1290 -LRRVTIDKRD--KSLGITIQCNNNGGGIFVSTVADKSTAMRAG-LQVGDQLLEVCGINMRAATQ 1350
             :.:|.:.|||  :.|||.:....:..|:|:..:.:...|.:.| |...|::|.:.|.:::..|.
  Rat   335 EVFQVLLHKRDSAEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKQGTP 399

  Fly  1351 EIAANVLRQCGDSFTMLVQYNPEKFPSIEYEGAHNLEPESPINHSGSPTPRNSPRPPARNSLFPL 1415
            |:||::::..|:...:                        .|...|.|.|.|..|....:|    
  Rat   400 ELAAHIIQASGERVNL------------------------TIARPGKPQPSNGSREAGAHS---- 436

  Fly  1416 PMQPQAPS-TRPGSRAPLSHQSIKDQSFTDSLENQSDISSSQDMPSSAATTTTTTASATSTVYDE 1479
            ....|.|| :||                          ||.:|:              |..|..:
  Rat   437 SNHAQPPSHSRP--------------------------SSHKDL--------------TRCVTCQ 461

  Fly  1480 EPKPSLPPPPASVPAETLRYVTLHMDKSKNLGIKLFG--GNKVG---IYVHDVAV-GSPSDHAGI 1538
            |                 :::|:..:..::||:.:.|  |:|.|   |:|..|.. |..:....|
  Rat   462 E-----------------KHITVKKEPHESLGMTVAGGRGSKSGELPIFVTSVPPHGCLARDGRI 509

  Fly  1539 RKGDQILEYNGVDLSGVTAEQA-----ANEISKLTDTVTMLVQNKLHTLKQIKDEPG 1590
            ::||.:|..||:||:.::..:|     |:..|.......:.||......:..:::||
  Rat   510 KRGDVLLNINGIDLTNLSHSEAVAMLKASAASPAVILKALEVQIAEEAAQATEEQPG 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlg5NP_609505.1 AAA_23 <165..333 CDD:290211
CENP-F_leu_zip 229..360 CDD:287450
DUF1090 <326..408 CDD:284007
PDZ_signaling 439..516 CDD:238492
PDZ_signaling 533..592 CDD:238492
PDZ_signaling 1290..1369 CDD:238492 20/81 (25%)
PDZ_signaling 1497..1576 CDD:238492 22/89 (25%)
SH3_DLG5 1594..1657 CDD:212794
Guanylate_kin 1737..1904 CDD:279019
NK <1773..1905 CDD:302627
Lnx2NP_001101799.1 mRING-HC-C3HC3D_LNX2 46..90 CDD:319694
PDZ 229..315 CDD:214570 22/160 (14%)
PDZ 335..421 CDD:214570 21/109 (19%)
PDZ_signaling 462..538 CDD:238492 21/92 (23%)
PDZ_signaling 595..679 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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