DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dlg5 and Gopc

DIOPT Version :9

Sequence 1:NP_609505.1 Gene:Dlg5 / 34573 FlyBaseID:FBgn0032363 Length:1916 Species:Drosophila melanogaster
Sequence 2:NP_001101101.2 Gene:Gopc / 309774 RGDID:1309512 Length:463 Species:Rattus norvegicus


Alignment Length:574 Identity:106/574 - (18%)
Similarity:198/574 - (34%) Gaps:200/574 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 VGSGNPYYFGKTQGCDG-SCSEKLAE--LKKERNMVAVEREKYKKSYI-------ELEKDRNYYR 211
            :.:|.|...|...|..| ||...::.  :...|.:..:|:| :.|:::       |::.|:....
  Rat     1 MSAGGPCPAGAGSGPGGASCPVGVSPGGVSMFRWLEVLEKE-FDKAFVDVDLLLGEIDPDQADIT 64

  Fly   212 ERGDENQKLKVLLSQESKNVLSLTEELNQLLSEKDNVLQEHQKMSDDLVLANKEIERLKKDEQLA 276
            ..|  .||:           .||:....||..:...|.|.:.|:...||....|:...:.::.:.
  Rat    65 YEG--RQKM-----------TSLSSCFAQLCHKAQTVSQINHKLEAQLVDLRSELTETQAEKVVL 116

  Fly   277 RAEI--KVLQLANADLK---------KRDLLKSRDSSWSKEFPSGKELENSK-----------EL 319
            ..|:  ::|||.:..|:         ....:|::.|..|.| ...:|||.:|           |:
  Rat   117 EKEVHDQLLQLHSTQLQLHAKTGQSVDSGAIKAKLSVHSME-DLERELEANKTEKVKEARLEAEV 180

  Fly   320 EKLRK---SLEKALSEVERSSQDAEEAKRVRDWAISQREKIVQ--ERDSVKTLCDKMRHE----- 374
            :.|||   :|.:.::.::.....|..|.:..|..::.|.:.:|  .||......||:.::     
  Rat   181 KLLRKENEALRRHIAVLQAEVYGARLAAKYLDKELAGRVQQIQLLGRDMKGPAHDKLWNQLEAEI 245

  Fly   375 ---RDKAISDSLMAIRDSEKIKK--------QKDEAQK--------KIDLLKEQMEQQERQNLDS 420
               |.|.:   :.|.|..:.:|:        .:|..:|        |:.||||     :.:.|..
  Rat   246 HLHRHKTV---IRACRGRQDLKRPMQAPPGHDQDSLKKSQGVGPIRKVLLLKE-----DHEGLGI 302

  Fly   421 NASGSRRSFRPSSYEGEDLLEVELSGYEHTSDLGIILDDSNKRKLVCGVTSSSPA--CGKLKIND 483
            :.:|                     |.||    |:.:       |:..:....||  ||.|.:.|
  Rat   303 SITG---------------------GKEH----GVPI-------LISEIHPGQPADRCGGLHVGD 335

  Fly   484 VICKVNNLDCQSLSKRMVLDEIRACAPRSLLLVSRTRHSKRHAYSVQLKTRDRDCPHGLQLDMGV 548
            .:..||.::.:.                       |:|.:    :|.:.::.|            
  Rat   336 AVLAVNGVNLRD-----------------------TKHKE----AVTILSQQR------------ 361

  Fly   549 FIAKIEQNSLAFYEPELDVGDRVLSINNKSMDSVQSIEEVMQLMNDPRSDGLNLFALKYVQDQLP 613
              .:|| ..:.:..||:|..|             :::|     ..|.......|:.     |:|.
  Rat   362 --GEIE-FEVVYVAPEVDSDD-------------ENVE-----YEDESGHRYRLYL-----DELE 400

  Fly   614 PGMTTSSAQTDSIDSMQ-------------HVSSAGGGGGSGPSSAT----KHP 650
            .|..:.::..||...|:             |.:...|..|..|...|    .||
  Rat   401 GGGNSGASCKDSSGEMKVLQGYNKKTVRDAHENGDVGASGESPLDDTAVRAAHP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlg5NP_609505.1 AAA_23 <165..333 CDD:290211 42/202 (21%)
CENP-F_leu_zip 229..360 CDD:287450 33/157 (21%)
DUF1090 <326..408 CDD:284007 20/107 (19%)
PDZ_signaling 439..516 CDD:238492 13/78 (17%)
PDZ_signaling 533..592 CDD:238492 8/58 (14%)
PDZ_signaling 1290..1369 CDD:238492
PDZ_signaling 1497..1576 CDD:238492
SH3_DLG5 1594..1657 CDD:212794
Guanylate_kin 1737..1904 CDD:279019
NK <1773..1905 CDD:302627
GopcNP_001101101.2 SMC_prok_B <35..>215 CDD:274008 39/194 (20%)
PDZ_signaling 287..369 CDD:238492 26/160 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.