DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dlg5 and caska

DIOPT Version :9

Sequence 1:NP_609505.1 Gene:Dlg5 / 34573 FlyBaseID:FBgn0032363 Length:1916 Species:Drosophila melanogaster
Sequence 2:XP_017213110.1 Gene:caska / 259195 ZFINID:ZDB-GENE-020802-4 Length:965 Species:Danio rerio


Alignment Length:720 Identity:135/720 - (18%)
Similarity:229/720 - (31%) Gaps:232/720 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1326 AMRAGLQVGDQLLEVCGINMRAATQEIAANVLRQCGDSFTMLVQYNPEKFPSIEYEGAHN----- 1385
            |.||..||.|.|.|:              :.|..|.:.               :.:..|:     
Zfish   344 AERAVSQVLDSLEEI--------------HALTDCSEK---------------DLDFLHSVFQDH 379

  Fly  1386 -----LEPESPINHSGSPTPRNSPRPPARNSLFPLPMQPQAPSTRPGSRAPLSHQSIKDQSFTDS 1445
                 |:....||...||..||    |:.:::    .:.:..||..||.|.|.|.....:..:..
Zfish   380 HLHTLLDLYDKINTKSSPQIRN----PSSDAV----QRAKETSTEDGSSAALKHLEYVLEEISCY 436

  Fly  1446 LEN--QSDISSSQDMPSSAATTTTTTASATSTVYDEEPKPSLPPP---------PASVPAE---- 1495
            .||  ..::......|...|...|....| ..||.::.....|||         |.|...:    
Zfish   437 PENTDAKELRRILTQPHFMALLQTHDVVA-HEVYSDDAMRVTPPPTSPYLNGDSPESTNGDMDIE 500

  Fly  1496 ---TLRYVTLHMDKSKNLGIKLFGGNKVGIYVHDVAVGSPSDHAG-IRKGDQILEYNGVDLSGVT 1556
               .:|.|....:..:.:||.|...:.....|..:..|......| :..||:|.|.||:.::..|
Zfish   501 NVTRVRLVQFQKNTDEPMGITLKMNDLNHCIVARIMHGGMIHRQGTLHIGDEIREINGISVANQT 565

  Fly  1557 AEQAANEISKLTDTVTMLVQNKLHTLKQ------------------------------------- 1584
            .||....:.::..::|..:.....|.:.                                     
Zfish   566 VEQLQKMLREMRGSITFKIVPSYRTQQSSCEKESPSTSRQSPANGHSSINSSILDLPSTIQPKGR 630

  Fly  1585 ------IKDEPGDSFYIRVGFD------------------RTGE----LNEDDLRFVKDEVLYVD 1621
                  |||:.....|:|..|:                  |.|:    :|:||..:.:.:   ::
Zfish   631 QISRPPIKDKFSIKIYVRAQFEYDPVKDDLIPCKEAGIRFRVGDIIQIINKDDHNWWQGK---LE 692

  Fly  1622 NTVFNGTFGLWRAWKLDAMGHRKECGIIPSQMKVEEELRSGEVVDCDTGTARRGSTSARRSFFRR 1686
            ||. |||                 .|:|||     .||:...|. |......:....|..::|.:
Zfish   693 NTK-NGT-----------------AGLIPS-----PELQEWRVA-CIAMEKTKQEQQASCTWFGK 733

  Fly  1687 KKNQRSSSRDSTEIASFSNTQLSFFPDLGLLNDDGGALSYQRVELLDSPIRRPVLIIGP------ 1745
            ||.|......:...|.|....|               ::|:.|..|.:..|:.::::|.      
Zfish   734 KKKQYKDKYLAKHNAVFDQLDL---------------VTYEEVVKLPAFKRKTLVLLGAHGVGRR 783

  Fly  1746 -LSECLMVRLTIDFS------------------NLFKLCEVTAMDCSQEAMEEGLKENIFVDYRR 1791
             :...|:.:....|:                  |.|.:        |.:.|.:.:..|.:::|..
Zfish   784 HIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYFFV--------SHDQMMQDISNNDYLEYGS 840

  Fly  1792 RGNKFECTTVEAISNACKNDRRH-----CILDVSISAVERLQRLQIYPIVLLLRFKSAKQIRDIR 1851
            ..:....|.:|.|.      :.|     .||||...|::.|:..:..|.|:   |.:|..|..  
Zfish   841 HEDAMYGTRLETIR------KIHEQGLIAILDVEPQALKVLRTAEFAPYVV---FIAAPTITP-- 894

  Fly  1852 DFGTDKI---SAKAAKEMYERAMK----LETDYKQYISAVIPGVSIKHMCTQIKDAVDKEQDKLL 1909
              |.:::   ..|...|..:|..|    |:..|..|....|....|......:::|:|.......
Zfish   895 --GMNELPRWCRKLPDESLQRLQKESEILQKTYAHYFDQTIINNEIDETIRLLEEAIDMVCSTAQ 957

  Fly  1910 WVPVS 1914
            |||||
Zfish   958 WVPVS 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlg5NP_609505.1 AAA_23 <165..333 CDD:290211
CENP-F_leu_zip 229..360 CDD:287450
DUF1090 <326..408 CDD:284007
PDZ_signaling 439..516 CDD:238492
PDZ_signaling 533..592 CDD:238492
PDZ_signaling 1290..1369 CDD:238492 10/42 (24%)
PDZ_signaling 1497..1576 CDD:238492 18/79 (23%)
SH3_DLG5 1594..1657 CDD:212794 17/84 (20%)
Guanylate_kin 1737..1904 CDD:279019 37/203 (18%)
NK <1773..1905 CDD:302627 31/143 (22%)
caskaXP_017213110.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.