DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dlg5 and pals1b

DIOPT Version :9

Sequence 1:NP_609505.1 Gene:Dlg5 / 34573 FlyBaseID:FBgn0032363 Length:1916 Species:Drosophila melanogaster
Sequence 2:NP_001171218.2 Gene:pals1b / 100422734 ZFINID:ZDB-GENE-060531-2 Length:639 Species:Danio rerio


Alignment Length:561 Identity:105/561 - (18%)
Similarity:198/561 - (35%) Gaps:121/561 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1406 PPARNSLFPLPMQPQAPSTRPGSRAPLSHQSIKDQSFTD-----------SLENQSDISSSQDMP 1459
            ||      |.|:...|...|....:.|  ||.|....|:           :|....|..:.|::.
Zfish   141 PP------PYPLTAHAQQLRGQVESVL--QSSKHTEATELTGLLTSPHLQALMEAHDCIAEQELD 197

  Fly  1460 SSAATTTTTTASATSTVYDEEPKPSLPPPPASVPAETLRYVTLHMDKSKNLGIKLFGGNKVGIYV 1524
            ..           |....|::.|             |.:.|:|...:...||:.:.......:..
Zfish   198 VD-----------TIEAVDQDEK-------------TTKLVSLEKIRDIPLGVTVRNEQDCVVIS 238

  Fly  1525 HDVAVGSPSDHAGIRKGDQILEYNGVDLSGVTAEQAANEISKLTDTVTMLV----QNKL------ 1579
            ..|:.|:......:.:||:|||.|.:.:.|.|.....:.:|.:..::|.|:    .|||      
Zfish   239 RVVSGGTAEKSNLLSEGDEILEINNIPVRGKTVNDVHDLLSSMYGSLTFLLIPNSHNKLPLDRPT 303

  Fly  1580 --HTLKQIKDEPGDSFYIRVGFDRTGELNEDDLRFVKDEVLYVDNTVFNGTFGLWRAWKLDAMGH 1642
              |.......:|.:..|:        ...|..|.|.:.::|:|.:   ......|:|::   .||
Zfish   304 VMHVKANFSYDPSEDPYV--------PCKELGLSFQRGDILHVTS---QDDPNWWQAYR---EGH 354

  Fly  1643 RKE---CGIIPSQMKVEEELRSGEVVDCDTGTARRGST-SARRSFFRRKKNQRSSSRDSTEIASF 1703
            ..:   .|:||.: ..::...:.:....|.....:|.. .|.||...|||               
Zfish   355 DDQKPLAGLIPGK-NFQQHREAMKKTITDKNEEYKGKLWCAIRSKKHRKK--------------- 403

  Fly  1704 SNTQLSFFPDLGLLNDDGGALSYQRVELLDSP--IRRPVLIIGPLS---ECLMVRLTIDFSNLF- 1762
                |.:.|:..:.:.....|:|:.|.|...|  .:|||.:|||.:   :.|..||.......| 
Zfish   404 ----LLYNPNKNIEHYSEDILTYEEVSLYRQPPDRKRPVALIGPANSGQDELRQRLLSSEPERFA 464

  Fly  1763 ----------KLCEVTAMD---CSQEAMEEGLKENIFVDYRRRGNKFECTTVEAISNACKNDRRH 1814
                      ::.||...:   .|:::.|..|....|::....||....|..:::.... |..:.
Zfish   465 AAVPHTTRSPRVHEVNGREYNFVSRQSFESELSAGKFIESGEYGNNLYGTNADSVRQVV-NSGKI 528

  Fly  1815 CILDVSISAVERLQRLQIYPIVLLLRFK--------SAKQIRDIRDFGTDKISAKAAKEMYERAM 1871
            |:|.:...:::.|....:.|.::.:|..        ..::...:...|..|...:..:||.|:|.
Zfish   529 CLLCLQPRSLQVLCSSDLKPYIIFIRPSPPPLSPPPPQERFSTMLARGVKKRMPEDVREMMEKAR 593

  Fly  1872 KLETDYKQYISAVIPGVSIKHMCTQIKDAVDKEQDKLLWVP 1912
            ::|..|.......|.....:....::...:.|..::..|:|
Zfish   594 EMEDSYGHLFDTFITNNEPEKSVCELLSIIQKLDNEPQWIP 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlg5NP_609505.1 AAA_23 <165..333 CDD:290211
CENP-F_leu_zip 229..360 CDD:287450
DUF1090 <326..408 CDD:284007
PDZ_signaling 439..516 CDD:238492
PDZ_signaling 533..592 CDD:238492
PDZ_signaling 1290..1369 CDD:238492
PDZ_signaling 1497..1576 CDD:238492 17/82 (21%)
SH3_DLG5 1594..1657 CDD:212794 13/65 (20%)
Guanylate_kin 1737..1904 CDD:279019 34/191 (18%)
NK <1773..1905 CDD:302627 23/139 (17%)
pals1bNP_001171218.2 L27_N 86..133 CDD:312557
L27 156..197 CDD:197794 8/42 (19%)
PDZ_signaling 211..290 CDD:238492 17/78 (22%)
SH3_MPP5 306..367 CDD:212969 15/74 (20%)
Guanylate_kin 434..626 CDD:331880 34/192 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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