DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dlg5 and whrna

DIOPT Version :9

Sequence 1:NP_609505.1 Gene:Dlg5 / 34573 FlyBaseID:FBgn0032363 Length:1916 Species:Drosophila melanogaster
Sequence 2:XP_002665968.3 Gene:whrna / 100334777 ZFINID:ZDB-GENE-091118-27 Length:939 Species:Danio rerio


Alignment Length:984 Identity:213/984 - (21%)
Similarity:328/984 - (33%) Gaps:270/984 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 SCSEKLAELKKERNMVA--VEREKYKKSYIELEKDRNYYRERGDENQKLKVLLSQESKNVLSLTE 236
            |.|..:.:|....|::.  :|||::..........||.|    |..|.|||:|:..||.  .|..
Zfish    24 SLSANVKKLHNALNLLLSDLEREQFIHCLNVYHSKRNVY----DLVQTLKVILNVPSKR--QLLP 82

  Fly   237 ELNQLLSEKDNVLQEHQKMSDDLVLANKEIERLKKDEQLAR--AEIKVLQLANADLKKRDLLKSR 299
            .|..::...|.:|.: |..|:.|.| ..||.....|...|:  |.......||....:..|..|.
Zfish    83 MLRLVIPRSDQLLFD-QYTSEGLYL-KSEIHARNGDPDGAQEGANSSPTHGANFPASQVALRGSP 145

  Fly   300 DS-SWSKE---------------FPSGK----ELENSKELEKLRKSLEKA--------LSEVERS 336
            || |.|.:               .|.|:    .|:..|..|.|..|:...        :|.||..
Zfish   146 DSISTSSDGTATLIPLLGRNFLPEPPGEIRQVILKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPG 210

  Fly   337 SQDAEEAKRVRDWAISQREKI---VQERDSVKTLCDKMRHERDKAISDSLMAIRDSEKI------ 392
            |...:|..|:.|..:...:|:   |...|:||.|         |......|::|...:|      
Zfish   211 SLAEKEGLRMGDQIMKVNDKVFDRVTHADAVKVL---------KGSKKLCMSVRSVGRIPGGYIT 266

  Fly   393 -------KKQKDEAQKKIDLLKEQMEQQERQNLDSNASGSRRSFRPSSYEGEDLLEVELSGYEHT 450
                   ..|........|||.|......|:   ||:.|  ||......:|::            
Zfish   267 NHVYTWVDPQGRSVSPPPDLLAEHRSATLRR---SNSQG--RSHMQLLQDGDE------------ 314

  Fly   451 SDLGIILDDSNKRKL-------------VCGVTSSSPA-CGKLKINDVICKVNNLDCQSLSKRMV 501
            ..:.::|||.....|             :.||...|.| ||.:|:.|.|.:||.....|:..   
Zfish   315 KKVNLVLDDGRSLGLMIRGGAEYSLGIYITGVDRGSAAECGGIKVGDQILEVNGRSFLSIPH--- 376

  Fly   502 LDE-IRACAPRSLLL-----VSRTRHSK------RHAYSVQLKTRDRDCP-HGLQLDMGVFIAKI 553
             || :|.......|:     |.|..|::      :...|.|:........ .|:.||.|...:. 
Zfish   377 -DEAVRVLKSSHHLMMTVKDVGRLPHTRTVVGETKWIASSQISDSSASSSVTGISLDQGASTSA- 439

  Fly   554 EQNSLAFYEPELDVGDRVLSINNKSMDSVQSIEEVMQLMNDPRSDGLNLFALKYVQ-----DQL- 612
               ...||:........:.|:.|:|...::  |:...|:.:|....:..:..:|..     :|| 
Zfish   440 ---KGGFYKGVAGSQVTLSSLVNQSRAMLE--EQARHLLTEPERQTMGYYIQEYRDGHVGVEQLV 499

  Fly   613 ------------------PPGMTTSS-----------AQTDSIDSMQHVSSAGGGGGSGPS-SAT 647
                              ..|:.|..           .:.|::.:.|     |||.|...| |..
Zfish   500 MALFELFNTHAKFSLLSEVRGIVTPQDVEKFDGLVLRREIDALKARQ-----GGGAGFQDSFSMV 559

  Fly   648 KHPSRFAE---FFFRKLKFS---KPGTPEDNFEQ---EHDDAI--AALDSVLSENSSEKS----- 696
            .:|...|.   .|......|   ..|..|:|.||   ||.:|:  .:||.|.|.:.|..|     
Zfish   560 SYPDTLASSSASFMTNTTLSSARNDGVAENNGEQGSLEHSNALPDISLDEVHSTSDSPPSFKPPP 624

  Fly   697 KENLFNRKKR----TKKEKEASKSMG---TWPRTNISHENPTGTMRGNEKKRALMSLFTAGPINV 754
            ...|..|..|    :|:...:|...|   |.|..:.:.|:     :..:..:|.||  ..|.:.:
Zfish   625 PPGLQRRPSRKATLSKRPSSSSSQSGLYFTAPSRSHTRES-----KHPKAPKAFMS--PPGTLKI 682

  Fly   755 DKDDELMGEVGVPEKQPAALIQDQLPPPLPPQMSKPLAHIRGSNGGAIKTHPNRNSNPV---SSG 816
            |          ||..|.:.:.|..:.|  .|::..|           .|..|.::|:|:   :..
Zfish   683 D----------VPASQLSVVSQHPIGP--FPRVQSP-----------NKAKPAQSSSPIPPPAPN 724

  Fly   817 VSALFPPGPPNGMPNTSYPTHPRHSLYGVTAEEINQKPIQRAPLMGANARVKMPSQERYGTRPHS 881
            |.|  |||||...|    |..|..|        ...||...:|  .:|....|....|....|..
Zfish   725 VPA--PPGPPPPPP----PPLPPPS--------CPDKPTPSSP--ASNQHFVMVEVHRPNAEPDV 773

  Fly   882 NHRLSLNITPSGDFYQPKTSGQQAQQQVMNASSTSAGFGV-GSGSMVGGTGPAAGEFPVRKQQVY 945
            |....|.....|...|...|||        ..|..:|..: .||.:...|.|.    |.|.:   
Zfish   774 NEVRPLPQVRGGTLSQLSDSGQ--------TLSEDSGVDIPESGRLSKDTSPR----PARTR--- 823

  Fly   946 DVFHPPPLPKNSSGSNMFMPLHPTRGSHPPPVGQPPDVVSLKSQNSIESILSAKSPAIS-EYGMY 1009
                   .|::..|..       ...:.||.:.:|...:       :....||.:..|: |.|..
Zfish   824 -------APRDGHGGG-------ETSAKPPGLLEPMSTL-------VRVAKSASTLGIAIEGGAN 867

  Fly  1010 AKRHVPQAV 1018
            .::.:|:.|
Zfish   868 TRQPLPRIV 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dlg5NP_609505.1 AAA_23 <165..333 CDD:290211 47/190 (25%)
CENP-F_leu_zip 229..360 CDD:287450 38/163 (23%)
DUF1090 <326..408 CDD:284007 21/105 (20%)
PDZ_signaling 439..516 CDD:238492 20/96 (21%)
PDZ_signaling 533..592 CDD:238492 10/59 (17%)
PDZ_signaling 1290..1369 CDD:238492
PDZ_signaling 1497..1576 CDD:238492
SH3_DLG5 1594..1657 CDD:212794
Guanylate_kin 1737..1904 CDD:279019
NK <1773..1905 CDD:302627
whrnaXP_002665968.3 HN_L-whirlin_R1_like 25..102 CDD:259822 22/83 (27%)
PDZ_signaling 174..255 CDD:238492 20/89 (22%)
PDZ_signaling 314..394 CDD:238492 20/95 (21%)
HN_L-whirlin_R2_like 459..538 CDD:259823 10/80 (13%)
PDZ_signaling 848..919 CDD:238492 7/36 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.