DRSC/TRiP Functional Genomics Resources

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Protein Alignment salm and ZNF208

DIOPT Version :9

Sequence 1:NP_723670.2 Gene:salm / 34569 FlyBaseID:FBgn0261648 Length:1365 Species:Drosophila melanogaster
Sequence 2:NP_009084.2 Gene:ZNF208 / 7757 HGNCID:12999 Length:1280 Species:Homo sapiens


Alignment Length:1125 Identity:205/1125 - (18%)
Similarity:326/1125 - (28%) Gaps:393/1125 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 HESQPNRRPSLDNTHKADTAQDA------LAKLKEMENTPLPF-----GSDLAS-SIITNHDDLP 400
            |.||..|..:.:|::|.:....|      |...|.......|:     |...:. ||:|.|    
Human   187 HLSQHKRIYTRENSYKCEEGGKAFNWSSTLTYYKSAHTGEKPYRCKECGKAFSKFSILTKH---- 247

  Fly   401 EPNSLDLLQKRAQEVLDSASQGILANSMADDFAFGEKSGE----GKGRNEP--FFKH-------- 451
                         :|:.:                ||||.:    ||..|:.  ..||        
Human   248 -------------KVIHT----------------GEKSYKCEECGKAFNQSAILTKHKIIHTGEK 283

  Fly   452 --RCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATP 514
              :|..|||.|...|.|..|...|.||:|:||..||..|:....|..|...||.:.|:   ....
Human   284 PNKCEECGKAFSKVSTLTTHKAIHAGEKPYKCKECGKAFSKVSTLITHKAIHAGEKPY---KCKE 345

  Fly   515 IPEHMDKFHPPLLDQMSPTDSSPNHSPAPPPLGSAPASFPPAFPGLQNLYRPPMEILKSLGAAAP 579
            ..:...||......::..|...|                                          
Human   346 CGKAFSKFSILTKHKVIHTGEKP------------------------------------------ 368

  Fly   580 HQYFPQELPTDLRKPSPQLDEDEPQVKNEPVEEKDQREEHEQEMAECSEPEPEPLPLEVRIKEER 644
              |..:|.....:.||           .....:|....|...:..||.:...   ...:..|.|.
Human   369 --YKCEECGKAYKWPS-----------TLSYHKKIHTGEKPYKCEECGKGFS---MFSILTKHEV 417

  Fly   645 VEEQEQVKQEDHRIEPRRTPSPSSEHRSPH----------------------HHRHSHMGYPPV- 686
            :...|:..:.:...:.....|...||:..|                      .|:..|.|..|. 
Human   418 IHTGEKPYKCEECGKAFNWSSNLMEHKKIHTGETPYKCEECGKGFSMFSILTKHKVIHNGEKPYK 482

  Fly   687 VQPIQPAALMHPQSSP-----------GSQSHLDH--LPTPGQLPPREDFFAERFPLNFTTAKML 738
            .:....|.  |....|           .|.:.::|  :.| |:.|    :..|....:|:|..:|
Human   483 CEECDKAT--HAGEKPYKCEECGKAFNWSSNLMEHKRIHT-GEKP----YKCEECGKSFSTFSIL 540

  Fly   739 SPEH------HSPVRSPAGGALPPGVPPPPHHHPHHMARSPF--------FNP----IKHEMAAL 785
            : :|      ..|.:....|..........:|...|....|:        ||.    |||:....
Human   541 T-KHKVIHTGEKPYKCEECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKAFNQSAILIKHKRIHT 604

  Fly   786 LPRPHSNDNSWENFIEVSN--------------TCET-----MKLKELMKNKKI---SDPNQCVV 828
            ..:|:..:...:.|.:||.              .|:.     :|:..|..:|.|   ..|.:|..
Human   605 GEKPYKCEECGKTFSKVSTLTTHKAIHAGEKPYKCKECGKTFIKVSTLTTHKAIHAGEKPYKCKE 669

  Fly   829 CDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKY 893
            |.:..|..|.|..|...||||:|:||..||:||....||..|..:|....|    ::|..|.|.:
Human   670 CGKAFSKFSILTKHKVIHTGEKPYKCEECGKAFNWSSNLMEHKRIHTGEKP----YKCEECGKSF 730

  Fly   894 SNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGALPGGPGGPPG 958
            |...||.:|..:||||                           .|:...                
Human   731 STFSVLTKHKVIHTGE---------------------------KPYKCE---------------- 752

  Fly   959 PNHGAHNGALGSESSQGDMDDNMDCGEDYD-DDVSSEHLSNSNLEQEGDRSRSGDDF--KSLLFE 1020
                                   :||:.|. ....|.|.....:|:.......|..|  .::|.:
Human   753 -----------------------ECGKAYKWSSTLSYHKKIHTVEKPYKCEECGKAFNRSAILIK 794

  Fly  1021 QKLRIDATGVVNTNPVRPRSSASSHGHSVGSTSAPTSPSVHASS--------------------- 1064
            .|.       ::|:....:........|..|| ..|..::||..                     
Human   795 HKR-------IHTDEKPYKCEECGKTFSKVST-LTTHKAIHAGEKPYKCKECGKAFSKFSILTKH 851

  Fly  1065 QVIKRSSSPARSEASQGALDLTPRAAPTSSSSSRSPLPKEKPVSPPSLPRSPSGSSHASANILTS 1129
            :||.....|.:.|....|...     |::.|..:.....|||..     ....|...:..:||| 
Human   852 KVIHTGEKPYKCEECGKAYKW-----PSTLSYHKKIHTGEKPYK-----CEECGKGFSMFSILT- 905

  Fly  1130 PLPPTVGIDCLPPGLQHHLQQQHQ--HLMQQQAAVAAAAAAQHHHHQQMAALHQHQEQLRREAAE 1192
                                 :|:  |..::.........|    ...::...:|:   :..|.|
Human   906 ---------------------KHEVIHTGEKPYKCEECGKA----FSWLSVFSKHK---KTHAGE 942

  Fly  1193 AQQKAAAAAAA--AAAAAAAQRQTPPQARDQR-QEGGPGAGPPPNPLMGARPPFGMFPNLPLFPP 1254
            ...|..|...|  :::..:..::...:.:..: :|.|.|              |..|..|     
Human   943 KFYKCEACGKAYKSSSTLSYHKKIHTEEKPYKYEECGKG--------------FSTFSIL----- 988

  Fly  1255 ATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKC 1319
             |...:.:...:         |:.            |..|.|.|...|.|..|.:.||.|.|:||
Human   989 -TKHKVIHTGEK---------PYK------------CEECGKAFNWSSNLMEHKKIHTGETPYKC 1031

  Fly  1320 SICDRGFTTKGNLKQHMLTH 1339
            ..||:.|:...:|.:|..||
Human  1032 EECDKAFSWPSSLTEHKATH 1051

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salmNP_723670.2 zf-C2H2 451..473 CDD:278523 9/31 (29%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
zf-H2C2_2 465..490 CDD:290200 11/24 (46%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
C2H2 Zn finger 826..846 CDD:275368 6/19 (32%)
zf-H2C2_2 838..863 CDD:290200 13/24 (54%)
zf-C2H2_2 854..922 CDD:289522 21/67 (31%)
C2H2 Zn finger 854..874 CDD:275368 8/19 (42%)
C2H2 Zn finger 886..906 CDD:275368 7/19 (37%)
C2H2 Zn finger 1291..1311 CDD:275368 7/19 (37%)
zf-H2C2_2 1303..1328 CDD:290200 11/24 (46%)
C2H2 Zn finger 1319..1339 CDD:275368 6/19 (32%)
ZNF208NP_009084.2 KRAB 4..64 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 175..195 CDD:275368 4/7 (57%)
C2H2 Zn finger 203..223 CDD:275368 3/19 (16%)
COG5048 227..619 CDD:227381 85/493 (17%)
C2H2 Zn finger 231..251 CDD:275368 6/36 (17%)
C2H2 Zn finger 259..279 CDD:275368 5/19 (26%)
C2H2 Zn finger 287..307 CDD:275368 8/19 (42%)
C2H2 Zn finger 315..335 CDD:275368 6/19 (32%)
C2H2 Zn finger 343..363 CDD:275368 2/19 (11%)
C2H2 Zn finger 371..391 CDD:275368 4/30 (13%)
zf-H2C2_2 384..407 CDD:290200 4/22 (18%)
C2H2 Zn finger 399..419 CDD:275368 4/22 (18%)
C2H2 Zn finger 427..447 CDD:275368 3/19 (16%)
zf-H2C2_2 439..463 CDD:290200 3/23 (13%)
C2H2 Zn finger 455..475 CDD:275368 1/19 (5%)
C2H2 Zn finger 499..519 CDD:275368 2/19 (11%)
zf-H2C2_2 511..536 CDD:290200 6/29 (21%)
C2H2 Zn finger 527..547 CDD:275368 5/20 (25%)
C2H2 Zn finger 555..575 CDD:275368 2/19 (11%)
zf-H2C2_2 568..592 CDD:290200 4/23 (17%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
zf-H2C2_2 596..619 CDD:290200 4/22 (18%)
C2H2 Zn finger 611..631 CDD:275368 3/19 (16%)
C2H2 Zn finger 639..659 CDD:275368 4/19 (21%)
C2H2 Zn finger 667..687 CDD:275368 6/19 (32%)
COG5048 691..1133 CDD:227381 92/519 (18%)
C2H2 Zn finger 695..715 CDD:275368 8/19 (42%)
zf-H2C2_2 707..732 CDD:290200 8/28 (29%)
C2H2 Zn finger 723..743 CDD:275368 7/19 (37%)
C2H2 Zn finger 751..771 CDD:275368 5/58 (9%)
zf-H2C2_2 764..788 CDD:290200 5/23 (22%)
C2H2 Zn finger 779..799 CDD:275368 4/26 (15%)
C2H2 Zn finger 807..827 CDD:275368 4/20 (20%)
C2H2 Zn finger 835..855 CDD:275368 1/19 (5%)
C2H2 Zn finger 863..883 CDD:275368 4/24 (17%)
zf-H2C2_2 876..899 CDD:290200 5/27 (19%)
C2H2 Zn finger 891..911 CDD:275368 5/41 (12%)
C2H2 Zn finger 919..939 CDD:275368 2/26 (8%)
C2H2 Zn finger 947..967 CDD:275368 2/19 (11%)
C2H2 Zn finger 976..995 CDD:275368 7/38 (18%)
C2H2 Zn finger 1003..1023 CDD:275368 7/19 (37%)
zf-H2C2_2 1015..1039 CDD:290200 10/23 (43%)
C2H2 Zn finger 1031..1051 CDD:275368 6/19 (32%)
C2H2 Zn finger 1059..1079 CDD:275368
C2H2 Zn finger 1087..1107 CDD:275368
zf-H2C2_2 1099..1124 CDD:290200
C2H2 Zn finger 1115..1135 CDD:275368
C2H2 Zn finger 1143..1163 CDD:275368
C2H2 Zn finger 1171..1191 CDD:275368
C2H2 Zn finger 1199..1219 CDD:275368
zf-H2C2_2 1212..1236 CDD:290200
C2H2 Zn finger 1227..1247 CDD:275368
C2H2 Zn finger 1255..1275 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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