DRSC/TRiP Functional Genomics Resources

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Protein Alignment salm and sall3a

DIOPT Version :10

Sequence 1:NP_723670.2 Gene:salm / 34569 FlyBaseID:FBgn0261648 Length:1365 Species:Drosophila melanogaster
Sequence 2:XP_068074900.2 Gene:sall3a / 560775 ZFINID:ZDB-GENE-020228-4 Length:1372 Species:Danio rerio


Alignment Length:1460 Identity:384/1460 - (26%)
Similarity:561/1460 - (38%) Gaps:477/1460 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SPSRSPEPEEEQPEEQSTSEQSIPEQSTPDHQLENDIKSEAKSEIEP------------------ 119
            |..:..:|::.:.:|..|..:.:||..:.:...::|..:|::|..|.                  
Zfish     2 SRRKQAKPQQLRSDEDPTLLELLPEHVSGEGVDDSDSGNESRSGSEETHVCEKCCAEFFKWSDFC 66

  Fly   120 --------------VEDNNNRVAMTKPSSEE--REPNASGSMPSSPVAEASAEEAATERTP---- 164
                          :.||.    :|...:::  .||:...|..|.|.....|.|.:...|.    
Zfish    67 EHLKTCTKNPLVLIISDNE----VTSDPAQDYLPEPSPVPSCVSDPANSEDAVEVSHMPTEGDEG 127

  Fly   165 -----------EKEKE-KDVEVDVEK---PDEAPSSAVPSTEVTLP--------GGAG-----AP 201
                       |||.| .:||:..||   ||:..:.|.|  :::||        .|||     ..
Zfish   128 AEMMLESGAVLEKEDEPMEVELSPEKPIDPDDPVTLAEP--DISLPPLEDHKQSSGAGYSIPSTN 190

  Fly   202 VTLEAIQNMQMAIAQFAAKTIANGSNGA-DNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQ 265
            ||||.:...::|:|||     :.|:.|| .:|.:...:..:...|..||||||.|::||:|::||
Zfish   191 VTLETLHGTRVAVAQF-----SQGARGALASEVSTMAIPMILDQLMALQQQQLRQLKLIEQIRSQ 250

  Fly   266 LAL--NQAKQEEDTEEDADQEQDQEQETDTYEEEERIADMELRQKAEARMAEAKARQHL------ 322
            :||  |||..:.......|..                .:..|:..:.:.:.....:.||      
Zfish   251 VALINNQAPTQTAVSHKVDHS----------------INAALQVPSSSSIPAMPGQLHLRGFITP 299

  Fly   323 --------------------INAGVPLRESSGSPA---------------ESLKRRREHDHESQ- 351
                                :::.:.:..:|||||               .||.....:....| 
Zfish   300 PINQLHMKGPNSLNVQASVAVSSALDVACTSGSPAGGQLASSGMKSNIAINSLYPTTSNGVSPQM 364

  Fly   352 PNRRPSLDN----THKADTAQDALAKLKEMENTPLPFGSDLASSIITNHDDLPEPNSLDLLQKRA 412
            |....|:.:    :....|..:....:....|||.|.       .:|:...|..|:||.|:..  
Zfish   365 PPCSVSISSSSCTSSSTGTGGEINCGISLPRNTPSPL-------TLTHGRLLTSPSSLPLVPH-- 420

  Fly   413 QEVLDSASQGILANSMA---------DDFAFGEKSGEGKGRN-----------EPFFKHRCRYCG 457
                .|::..|..|.:|         |..:...|..:||..|           :|||||:||:|.
Zfish   421 ----SSSNSVIFPNPLASIAATTNALDPLSALMKHRKGKPPNVSVFDTKPSSEDPFFKHKCRFCA 481

  Fly   458 KVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKF 522
            ||||||||||||:||||||||||||:||:||:||||||||||||.:|:||:.||..|:||::|..
Zfish   482 KVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEYLDNV 546

  Fly   523 HPPLLDQMSPTDSSPNHSPAPPP-------LGSAPASFPPAFPGLQNLYRPPM--EILKSLG--- 575
                     ||.|...:..:.||       |.|.|  ..|..|....|..||.  .|:.|.|   
Zfish   547 ---------PTSSGIPYGMSLPPEKPVTTWLDSKP--ILPTIPTSVALQLPPTIPSIIGSYGDST 600

  Fly   576 AAAPHQYFPQELPTDLRKPSPQLDEDEPQVKNEPVEEKDQREEHEQEMAECSEPEPEPLPLEVRI 640
            :.:|....||       :|||                         ..:||:...|..|..|..|
Zfish   601 SFSPLNRSPQ-------RPSP-------------------------PSSECTSLSPNHLITETSI 633

  Fly   641 KEERVEEQEQVKQEDHRIEPRRTPSPSSEHRSPHHHRHSHMGYPPVVQPIQPAALMHPQSSPGSQ 705
                    .|:..         :|.|:....:           |||   ::|.||          
Zfish   634 --------AQISS---------SPQPNLASNT-----------PPV---LKPEAL---------- 657

  Fly   706 SHLDHLPT-----PGQLPPREDFFAERFPLNF-TTAKMLSPEHHSPVRSPAGGALPPGVPPPPHH 764
                |||.     ||:........::...... ||......:...||.|.:..:           
Zfish   658 ----HLPANSTTRPGETSISTTSISQVISTTIVTTTCSTRTQLTDPVNSSSAVS----------- 707

  Fly   765 HPHHMARSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTCETMKLKELMKN--KKISDPNQCV 827
            ||........|.| |.....||              :...|.||.||::|::|  ||::||||||
Zfish   708 HPSLQISLNQFKP-KFPFGGLL--------------DSMQTSETSKLQQLVENIDKKMTDPNQCV 757

  Fly   828 VCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKK 892
            :|.|||||:|||:||||.|||||||||:|||||||||||||||..||:.:||:|..|.||:|.||
Zfish   758 ICHRVLSCQSALKMHYRIHTGERPFKCKICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKK 822

  Fly   893 YSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHFGALPGGPGGPP 957
            ::||:|||||||:|.|.....||               :|..|.:..|..:|.            
Zfish   823 FTNAVVLQQHIRMHMGGQIPNTP---------------LPDTFQDTDADLSFD------------ 860

  Fly   958 GPNHGAHNGALGSESSQGDMDDNMDCGEDYDDDVSSE---------HLSNSNLEQE------GDR 1007
                                :.::|...:|||::..|         .|.:.|::.:      .:.
Zfish   861 --------------------EKSLDAMSNYDDELIDEMDQALEDETGLKDENMDLQKQLHLYSEM 905

  Fly  1008 SRSGDDFKSLL-----FEQKLRID--ATGVVNTNPVRPRSSASS--------------------H 1045
            |.|.....||:     ||.::::.  |..:.::..|:|..:.|.                    .
Zfish   906 SPSTSPPTSLISSIGAFENEMKLSDPAVNITHSFSVKPTENGSGVDGVNGDMLKNDLSSTLVDLE 970

  Fly  1046 GHSVGSTSAPTSPSVHASSQVIKRSSSPARSEASQGALDLTPRAAPTSSSSSRSPLPKEKPVSPP 1110
            .||||                     |||:||:|...|.|:|  ..:.|.|.||           
Zfish   971 NHSVG---------------------SPAQSESSGSMLALSP--TYSQSESHRS----------- 1001

  Fly  1111 SLPRSPSGSSHASANILTSPLPPTVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQQ 1175
               :||..:|.:....|||                   ...|..:..:|..:.:..:      :.
Zfish  1002 ---KSPQANSSSKDEALTS-------------------TSAHAMVKSEQLDIHSPGS------EN 1038

  Fly  1176 MAALHQHQEQLRREAAEAQQKAAAAAAAAAAAAAAQRQTPPQARDQRQEGGPGAGPPPNPLMGAR 1240
            ..||.....|..|...:.:...:..........:.......::...:.|.  |...||....|..
Zfish  1039 TGALDLTATQPTRSFVKDENPFSLLFLGRDRGLSTPSNISSESSTVKFEN--GHSKPPALCEGPH 1101

  Fly  1241 PPFGMFPNLPLFPPATTQNMCNAMNQIAQSVMP-AAPFNPLALSGVRGSTTCGICYKTFPCHSAL 1304
            .|.|     |..|.||.|      ..|:.::.| .||..|..........:||   |.|...|||
Zfish  1102 LPVG-----PQVPTATAQ------TTISSNITPMLAPPPPRRTPKQHNCHSCG---KNFSSASAL 1152

  Fly  1305 EIHYRSHTKERPFKCSICDRGFTTKGNLKQ 1334
            :||.|:||.|:||.||||.|.||||||||:
Zfish  1153 QIHERTHTGEKPFGCSICGRAFTTKGNLKE 1182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salmNP_723670.2 SUF4-like 450..520 CDD:411020 53/69 (77%)
C2H2 Zn finger 453..474 CDD:411020 17/20 (85%)
C2H2 Zn finger 453..473 CDD:275368 16/19 (84%)
C2H2 Zn finger 481..501 CDD:411020 16/19 (84%)
C2H2 Zn finger 481..501 CDD:275368 16/19 (84%)
SUF4-like 826..>876 CDD:411020 41/49 (84%)
C2H2 Zn finger 826..847 CDD:411020 15/20 (75%)
C2H2 Zn finger 826..846 CDD:275368 15/19 (79%)
C2H2 Zn finger 854..874 CDD:411020 16/19 (84%)
C2H2 Zn finger 854..874 CDD:275368 16/19 (84%)
C2H2 Zn finger 886..906 CDD:275368 14/19 (74%)
SUF4-like 1291..>1341 CDD:411020 28/44 (64%)
C2H2 Zn finger 1291..1312 CDD:411020 10/20 (50%)
C2H2 Zn finger 1291..1311 CDD:275368 10/19 (53%)
zf-C2H2 1317..1339 CDD:395048 14/18 (78%)
C2H2 Zn finger 1319..1339 CDD:411020 13/16 (81%)
C2H2 Zn finger 1319..1339 CDD:275368 13/16 (81%)
sall3aXP_068074900.2 None

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