DRSC/TRiP Functional Genomics Resources

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Protein Alignment salm and znf983

DIOPT Version :9

Sequence 1:NP_723670.2 Gene:salm / 34569 FlyBaseID:FBgn0261648 Length:1365 Species:Drosophila melanogaster
Sequence 2:NP_001121715.1 Gene:znf983 / 560276 ZFINID:ZDB-GENE-060503-812 Length:715 Species:Danio rerio


Alignment Length:1035 Identity:192/1035 - (18%)
Similarity:290/1035 - (28%) Gaps:425/1035 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 LPEPNSLDLLQKRAQEVLDSASQGILANSMADDFAFGEKSGEGKGRNE----------PFFKHRC 453
            :|||  ..:.|:..:|::|...:   :..:.:|....:...|.|.::|          ......|
Zfish     3 VPEP--CRIKQEDTEELIDVKEE---SEELNEDEEKHQVKSEEKTQSETEQSISVKATAVNSLTC 62

  Fly   454 RYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEH 518
            ..|||.|...|.|..|:|.||||:||||..|..||.:..|||.|.:.|..:.||           
Zfish    63 TQCGKSFTRKSGLNDHMRIHTGEKPFKCPHCDWRFNSLRNLKSHIRLHTGEKPH----------- 116

  Fly   519 MDKFHPPLLDQMSPTDSSPNHSPAPPPLGSAPASFPPAFPGLQNLYRPPMEILKSLGAAAPH-QY 582
                      |.|......|||                                  |....| :.
Zfish   117 ----------QCSHCSKRFNHS----------------------------------GQLKSHLRI 137

  Fly   583 FPQELPTDLRKPSPQLDEDEPQVKNEPVEEKDQREEHEQEMAEC-------SEPEPEPLPLE-VR 639
            ...|.|.:......:....    ||....|:...||.......|       |..:...|..: |.
Zfish   138 HTGEKPFECSHCGKRFSVS----KNMKAHERIHTEEKPYHCTACGMTFSYLSSLQKHTLNCQNVT 198

  Fly   640 IKEERVEEQEQVKQEDHRIEPRRTPSPSSEHRSPHHHRHSHMGYPPVVQPIQPAALMHPQSSPGS 704
            :|||..|..|.||.|:      :|.|.:                                     
Zfish   199 VKEESEELNEDVKSEE------KTQSET------------------------------------- 220

  Fly   705 QSHLDHLPTPGQLPPREDFFAERFPLNFTTAKMLSPEHHSPVRSPAGGALPPGVPPPPHHHPHHM 769
                                                ||...|:..|                   
Zfish   221 ------------------------------------EHSISVKGTA------------------- 230

  Fly   770 ARSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTCETMKLKELMKNKKISDPNQCVVCDRVLS 834
                                   .|||                            .|..|.:.||
Zfish   231 -----------------------VNSW----------------------------TCTQCGKSLS 244

  Fly   835 CKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVL 899
            |||||..|.|.||||:|::|..||:.|:....||:|..:|....|    :||..|.|::|.:..|
Zfish   245 CKSALNTHMRIHTGEKPYQCSHCGKRFSNSAYLKSHKRIHTEEKP----YQCSHCDKRFSFSQNL 305

  Fly   900 QQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAF-----HFGALPGGPGGPPGP 959
            :.|:|.||||                           .|:...|.     |..:|.     ....
Zfish   306 KTHLRTHTGE---------------------------KPYHCTACGKSFRHMSSLQ-----THTR 338

  Fly   960 NHGAHNGAL-GSE-------SSQGDMDDNMDCGEDY---------------DDDVSSEHLSN--- 998
            ||  ||..: |||       :|:....:..:||:.:               ::.....|...   
Zfish   339 NH--HNVMVEGSEDKEKHHVTSKQKTFNCTECGKSFKRKYHLIFHLKIHSGENPYKCSHCDKRFR 401

  Fly   999 -SNLEQEGDRSRSGDDF-------KSLLFEQKLRIDATGVVNTNPV-------RPRSSASSHGHS 1048
             :|:.:..:...:|::.       |:..:...|::.........|.       |.|||:....|.
Zfish   402 CTNVRKAHEMIHTGEELYKCSHCNKTFRYSGLLKVHERTHTGEKPYKCSHCEKRFRSSSGKKVHE 466

  Fly  1049 VGSTSAPTSPSVHA------SSQVIKRSSSPARSEASQGALDLTPRAAPTSSSSSRSPLPKEKPV 1107
            ...|.....|....      |.|:||      ......|                      ||| 
Zfish   467 RTHTGEKPFPCSRCKKRFRDSRQLIK------HERVHTG----------------------EKP- 502

  Fly  1108 SPPSLPRSPSGSSHASANILTSPLPPTVGIDCLPPGLQHHLQQQHQHL-MQQQAAVAAAAAAQHH 1171
                .|.:..|.....::.|.:   .||.|..:...:.:|.....:.| :..:...:.|..:..:
Zfish   503 ----YPCNACGKRFRQSSTLRA---HTVNIHNVKEKMDNHSIHTTEKLHLCSECGKSFATQSYLN 560

  Fly  1172 HHQQMAALH-------------------QHQEQLRREAAEAQQKAAAAAAAAAAAAAAQRQTPPQ 1217
            .||:   :|                   |..|.:.....|...:..........|:..:......
Zfish   561 AHQK---IHFGEKPFTCTQCGRSFRYSSQLNEHMMTHTGEKPHECDQCGKRFLKASNLKVHFGVH 622

  Fly  1218 ARDQRQEGGPGAGPPPNPLMG---ARPPFGMFPNLPLFPPATTQNMCNAMNQIAQSVMPAAPFNP 1279
            .:::         |.|.|:.|   |||                 ::.....||.           
Zfish   623 TKEK---------PYPCPVCGKMFARP-----------------SLVKEHEQIH----------- 650

  Fly  1280 LALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCSICDRGFTTKGNLKQHMLTH 1339
               .||: ...|.:|.|:|....||:.|.:.||.|||.||..|.|.|.....||.|:..|
Zfish   651 ---IGVK-KYQCLVCEKSFLRPGALKQHLKIHTGERPHKCDQCGRAFVRSAQLKCHLKVH 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salmNP_723670.2 zf-C2H2 451..473 CDD:278523 9/21 (43%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
zf-H2C2_2 465..490 CDD:290200 14/24 (58%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
C2H2 Zn finger 826..846 CDD:275368 11/19 (58%)
zf-H2C2_2 838..863 CDD:290200 13/24 (54%)
zf-C2H2_2 854..922 CDD:289522 21/67 (31%)
C2H2 Zn finger 854..874 CDD:275368 7/19 (37%)
C2H2 Zn finger 886..906 CDD:275368 7/19 (37%)
C2H2 Zn finger 1291..1311 CDD:275368 7/19 (37%)
zf-H2C2_2 1303..1328 CDD:290200 13/24 (54%)
C2H2 Zn finger 1319..1339 CDD:275368 7/19 (37%)
znf983NP_001121715.1 C2H2 Zn finger 62..82 CDD:275368 9/19 (47%)
COG5048 86..521 CDD:227381 124/716 (17%)
C2H2 Zn finger 90..110 CDD:275368 8/19 (42%)
zf-H2C2_2 102..127 CDD:290200 9/45 (20%)
C2H2 Zn finger 118..138 CDD:275368 6/53 (11%)
zf-H2C2_2 131..154 CDD:290200 3/22 (14%)
C2H2 Zn finger 146..166 CDD:275368 3/23 (13%)
C2H2 Zn finger 174..190 CDD:275368 2/15 (13%)
C2H2 Zn finger 236..256 CDD:275368 11/19 (58%)
zf-H2C2_2 248..273 CDD:290200 13/24 (54%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
zf-H2C2_2 276..300 CDD:290200 9/27 (33%)
C2H2 Zn finger 292..312 CDD:275368 7/19 (37%)
zf-H2C2_2 304..329 CDD:290200 9/51 (18%)
C2H2 Zn finger 320..340 CDD:275368 3/24 (13%)
C2H2 Zn finger 367..385 CDD:275368 2/17 (12%)
C2H2 Zn finger 393..413 CDD:275368 2/19 (11%)
C2H2 Zn finger 421..441 CDD:275368 2/19 (11%)
zf-H2C2_2 434..458 CDD:290200 3/23 (13%)
C2H2 Zn finger 449..469 CDD:275368 5/19 (26%)
C2H2 Zn finger 477..497 CDD:275368 4/25 (16%)
C2H2 Zn finger 505..526 CDD:275368 4/23 (17%)
C2H2 Zn finger 546..566 CDD:275368 3/22 (14%)
C2H2 Zn finger 574..594 CDD:275368 2/19 (11%)
C2H2 Zn finger 602..622 CDD:275368 1/19 (5%)
zf-H2C2_2 614..639 CDD:290200 4/33 (12%)
C2H2 Zn finger 630..650 CDD:275368 6/36 (17%)
C2H2 Zn finger 658..678 CDD:275368 7/19 (37%)
zf-H2C2_2 670..695 CDD:290200 13/24 (54%)
C2H2 Zn finger 686..706 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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