DRSC/TRiP Functional Genomics Resources

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Protein Alignment salm and Zfp219

DIOPT Version :9

Sequence 1:NP_723670.2 Gene:salm / 34569 FlyBaseID:FBgn0261648 Length:1365 Species:Drosophila melanogaster
Sequence 2:NP_001007682.1 Gene:Zfp219 / 305848 RGDID:1359259 Length:726 Species:Rattus norvegicus


Alignment Length:831 Identity:168/831 - (20%)
Similarity:245/831 - (29%) Gaps:339/831 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 CRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVP-------- 509
            |..|||.|..:|.|.:|:|:|.|.:.|:|..||.|...:..|:.|.:.|..:.|..|        
  Rat    63 CPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLEL 127

  Fly   510 -------------------MNATPIPEHMDKFHPPLLDQMSPTDSSPNHSPAPPPLGSAPASFPP 555
                               |.::|..|.:                      |.|.:.|:.|...|
  Rat   128 EERALLREARLGRARSSGGMQSSPAAEGL----------------------ARPQVPSSSAFRCP 170

  Fly   556 AFPG-----------LQNLYRPPMEILKSLGAAAPHQYFPQEL-------------PTDLRKPSP 596
            ...|           |..|:||....|.|.|::...:.....|             .|...:|.|
  Rat   171 FCKGKFRTSAERERHLHILHRPWKCSLCSFGSSQEEELLHHSLTAHGASERPLAATATPEPQPPP 235

  Fly   597 QLDEDEPQVKNEPVEEKDQREEHEQEMAEC---SEPEPEPLPLEVRIK----------------- 641
            |   .||:...||..|.:.|.|.|:|....   :.||..|.|.|.|.:                 
  Rat   236 Q---QEPRSALEPEPEPEPRPEPEREANPAPTPAPPEEPPAPPEFRCQVCGQSFTQSWFLKGHMR 297

  Fly   642 -----------------EERVEEQEQVKQEDHRIEPRRTPSP-SSEHRSPHHHRHSHMGYPPVVQ 688
                             :|....:..:|....::.|.|.|.| |:..|:|.....|.:.|    :
  Rat   298 KHKASFDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGSAPARAPQPPDLSLLAY----E 358

  Fly   689 PIQPAALMHPQSSPGSQSHLDHLPTPGQL--PPREDFFAERFPLNFTTAKMLSPEHHSPVRSPAG 751
            |:.||.|:.|            .|||.:.  ||.        .|.:.:.:......:.....|.|
  Rat   359 PLGPALLLAP------------APTPAERREPPS--------LLGYLSVRAGEVRPNGEGADPGG 403

  Fly   752 GALPPGVPPPPHHHPHHMARSPFFNPIKHE------------------MAALLPRPHSNDNSWEN 798
            |....|..|.|...|:...|.....|.:.|                  :.:|.|.|  .:.|.::
  Rat   404 GRSYGGFRPLPSALPNRARRHRTEEPEEEEEVVEAEEESWARGRSLGSLTSLHPNP--GEGSGQS 466

  Fly   799 FIEV---SNTCETMKLKELMKNKKISDPNQ------CVVCDRVLSCKSALQMHYRTHTGERPFKC 854
            ...|   :.:..|.:...|:.....|:..:      |..|.:.......|::|.|.||||||:||
  Rat   467 APAVGAQARSTATQEENGLLVGGTRSEAGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKC 531

  Fly   855 RICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQ 919
            ..|..|.|..|:||.|                            ||:|.|           ||..
  Rat   532 PHCDYAGTQSGSLKYH----------------------------LQRHHR-----------EQRS 557

  Fly   920 AAEIRDPPPSMMPGHFMNPFAAAAFHFGALPGGPGGPPGPNHGAHNGALGSESSQGDMDDNMDCG 984
            :|                              |||.||.|...:..|:|..:|.           
  Rat   558 SA------------------------------GPGPPPEPPPPSQRGSLQPQSG----------- 581

  Fly   985 EDYDDDVSSEHLSNSNLEQEGDRSRSGDDFKSLLFEQKLRIDATGVVNTNPVRPRSSASSHGHSV 1049
                                               .:..:..||.|..|...||.||::    ..
  Rat   582 -----------------------------------AKPTQASATWVEGTASTRPTSSST----GP 607

  Fly  1050 GSTSAPTSPSVHASSQVIKRSSSPARSEASQGALDLTPRAAPTSSSS------------------ 1096
            ||...|.||.         |:....|...:: .|||:.||.|...:.                  
  Rat   608 GSRRKPASPG---------RTLRNGRGGEAE-PLDLSLRAGPGGEAGSGGALHRCLFCPFATGAP 662

  Fly  1097 -----------SRSPLPKEKP---VSPPSLPRSPSGSSHASANILTSPLPP 1133
                       ||....:.:|   .|||.: |:|||.        |.|.||
  Rat   663 ELMALHLQVHHSRRARGRRQPRADTSPPYV-RAPSGE--------TPPSPP 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salmNP_723670.2 zf-C2H2 451..473 CDD:278523 9/19 (47%)
C2H2 Zn finger 453..473 CDD:275368 9/19 (47%)
zf-H2C2_2 465..490 CDD:290200 10/24 (42%)
C2H2 Zn finger 481..501 CDD:275368 6/19 (32%)
C2H2 Zn finger 826..846 CDD:275368 5/19 (26%)
zf-H2C2_2 838..863 CDD:290200 13/24 (54%)
zf-C2H2_2 854..922 CDD:289522 14/67 (21%)
C2H2 Zn finger 854..874 CDD:275368 8/19 (42%)
C2H2 Zn finger 886..906 CDD:275368 4/19 (21%)
C2H2 Zn finger 1291..1311 CDD:275368
zf-H2C2_2 1303..1328 CDD:290200
C2H2 Zn finger 1319..1339 CDD:275368
Zfp219NP_001007682.1 C2H2 Zn finger 63..83 CDD:275368 9/19 (47%)
zf-C2H2 89..111 CDD:395048 7/21 (33%)
C2H2 Zn finger 91..111 CDD:275368 6/19 (32%)
C2H2 Zn finger 169..187 CDD:275368 2/17 (12%)
C2H2 Zn finger 195..211 CDD:275368 3/15 (20%)
zf-C2H2 277..299 CDD:395048 1/21 (5%)
C2H2 Zn finger 279..299 CDD:275368 0/19 (0%)
zf-C2H2 305..327 CDD:395048 2/21 (10%)
C2H2 Zn finger 307..327 CDD:275368 2/19 (11%)
C2H2 Zn finger 503..523 CDD:275368 5/19 (26%)
zf-C2H2 503..523 CDD:395048 5/19 (26%)
zf-H2C2_2 515..537 CDD:404364 12/21 (57%)
zf-H2C2_5 529..552 CDD:404746 11/50 (22%)
C2H2 Zn finger 531..551 CDD:275368 10/47 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340123
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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