DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment salm and Zfp111

DIOPT Version :9

Sequence 1:NP_723670.2 Gene:salm / 34569 FlyBaseID:FBgn0261648 Length:1365 Species:Drosophila melanogaster
Sequence 2:NP_579857.1 Gene:Zfp111 / 170849 RGDID:620595 Length:744 Species:Rattus norvegicus


Alignment Length:801 Identity:162/801 - (20%)
Similarity:250/801 - (31%) Gaps:277/801 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 LFNLQQQQLFQIQLIQQLQSQLA---------------------LNQAKQEEDTEEDADQEQDQE 288
            |.:..|::|:...:::.|::.||                     |.|....|.|..||:      
  Rat    24 LLDAAQRKLYHDVMLENLRNLLAVGGQSPNKMKTVDATGVRCLLLGQLLYWEITGHDAN------ 82

  Fly   289 QETDTYEEEERIADMELRQKAEARMAEAKARQHLINAG---------VPLRES-SGSPAESLKRR 343
                           :|.:..||.:.......|.:..|         .|.|.| ..|..:||.| 
  Rat    83 ---------------KLARAPEAVVHTQGKGSHFLEQGHSSCHREAEEPRRPSEDDSSLDSLTR- 131

  Fly   344 REHDHESQPNRRPSLDNTHKADTAQDALAKLKE---------MENTPLPFGSDLASSIITNH--- 396
               ||.|....:..|....:....:..|.|.:.         |:|.|         .::|.|   
  Rat   132 ---DHSSTTENQEFLSGRAQGSWCKTHLRKRQNHQKHCLQTLMKNKP---------ELLTQHSPV 184

  Fly   397 ----DDLPEPNSLDLLQK----RAQEVLDSASQGILANSMADDFA---FGEKSGEGKGRNEPFFK 450
                :|....:|:.:.|.    |.:.......:|...:|......   .|||........:.|.:
  Rat   185 QRTQEDSRHSSSVPIQQSVHPGRKRYWCHECGKGFSQSSALQTHRRVHTGEKPCRDNSCRKSFSR 249

  Fly   451 ----------------HRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQ 499
                            :||:.|||.|...|.||.|.|.||||:|:||..||.||:...||..|.:
  Rat   250 SSGLSIHRQVHTGERPYRCKVCGKGFLRWSHLQAHERIHTGEKPYKCGECGKRFSCISNLHTHQR 314

  Fly   500 RHAQKFPHVPMNATPIPEHMDK----------FHPPLLDQMSPTDSSPN---------------H 539
            .|:::.|:          ..||          .|   :.|...|...|.               |
  Rat   315 FHSKEKPY----------KCDKCGKCFSLNFNLH---IHQRVHTGEKPYKCEECGKCFSLSFNLH 366

  Fly   540 SPAPPPLGSAPASFPPAFPGLQNLYRPPMEILKSLGAAAPHQYFPQELPTDLRKPSPQLDEDEPQ 604
            |......|..|             |:.. |..|...:|:..|            ...|:...|..
  Rat   367 SHQRVHTGEKP-------------YKCE-ECGKCFSSASSFQ------------RHRQIHIKEKT 405

  Fly   605 VKNEPVEEKDQREEHEQEMAECSEPEPEPLPLEVRIKEERVEEQEQVKQEDHRIEPRRTPSPSSE 669
            :..:...:...|:.:.|                   ..:||..||         :|.|..|....
  Rat   406 LHRDVCGKGSSRDSNLQ-------------------THQRVHIQE---------KPYRCNSCGKS 442

  Fly   670 HRSP---HHHRHSHMGYPP-----------VVQPIQPAALMHPQSSP------------GSQSHL 708
            .|..   :.||..|.|..|           .:..:|....:|....|            .|..|.
  Rat   443 FRCSMDLNIHRRVHTGEKPYKCEVCGKGFNYLSHLQAHEKIHADQKPYKCEYCGRRFSYSSNLHT 507

  Fly   709 DHLPTPGQLPPREDFFAERFPLNFTTAKMLSPEHHSPVRSPAGGALPPGVPPPPHHHPHHMARSP 773
            ......|:.|    :..|....:|:.|..|  :.|..|::                     .:.|
  Rat   508 HQRVHTGEKP----YKCEECGKSFSLASSL--QAHQRVQT---------------------GKKP 545

  Fly   774 F------------FNPIKHEMAALLPRPHSNDNSWENFIEVSNTCETMKLKELMKNKKI---SDP 823
            |            :|...|:......:|:..|...:.|.:.|:         |..:::|   ..|
  Rat   546 FKCNACQKRFSQAWNLQAHQRVHTGEKPYKCDTCGKAFGQRSS---------LQIHQRIHTGEKP 601

  Fly   824 NQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPV 888
            .:|..|.:..|..|.|..|.|.||||:|::|..||:.|:...:|:||..:|....|.    ||..
  Rat   602 FKCEECGKEFSLNSGLTAHRRVHTGEKPYECTECGKGFSLASSLRTHQRIHTGEKPF----QCNE 662

  Fly   889 CHKKYSNALVLQQHIRLHTGE 909
            |.|::|....||.|.|:||||
  Rat   663 CQKRFSQVSHLQSHQRVHTGE 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salmNP_723670.2 zf-C2H2 451..473 CDD:278523 11/21 (52%)
C2H2 Zn finger 453..473 CDD:275368 10/19 (53%)
zf-H2C2_2 465..490 CDD:290200 15/24 (63%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
C2H2 Zn finger 826..846 CDD:275368 7/19 (37%)
zf-H2C2_2 838..863 CDD:290200 12/24 (50%)
zf-C2H2_2 854..922 CDD:289522 22/56 (39%)
C2H2 Zn finger 854..874 CDD:275368 7/19 (37%)
C2H2 Zn finger 886..906 CDD:275368 8/19 (42%)
C2H2 Zn finger 1291..1311 CDD:275368
zf-H2C2_2 1303..1328 CDD:290200
C2H2 Zn finger 1319..1339 CDD:275368
Zfp111NP_579857.1 KRAB 8..>54 CDD:214630 6/29 (21%)
KRAB 8..47 CDD:279668 5/22 (23%)
COG5048 <106..396 CDD:227381 70/341 (21%)
C2H2 Zn finger 212..232 CDD:275368 2/19 (11%)
C2H2 Zn finger 241..260 CDD:275368 1/18 (6%)
C2H2 Zn finger 268..288 CDD:275368 10/19 (53%)
zf-H2C2_2 280..305 CDD:290200 15/24 (63%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
COG5048 306..721 CDD:227381 95/485 (20%)
C2H2 Zn finger 324..344 CDD:275368 4/22 (18%)
zf-H2C2_2 340..360 CDD:290200 3/19 (16%)
C2H2 Zn finger 352..372 CDD:275368 2/19 (11%)
zf-H2C2_2 367..389 CDD:290200 6/35 (17%)
C2H2 Zn finger 380..400 CDD:275368 5/32 (16%)
C2H2 Zn finger 409..428 CDD:275368 3/37 (8%)
zf-H2C2_2 420..445 CDD:290200 8/52 (15%)
C2H2 Zn finger 436..456 CDD:275368 4/19 (21%)
zf-H2C2_2 448..473 CDD:290200 5/24 (21%)
C2H2 Zn finger 464..484 CDD:275368 1/19 (5%)
C2H2 Zn finger 492..512 CDD:275368 2/19 (11%)
zf-H2C2_2 507..528 CDD:290200 3/24 (13%)
C2H2 Zn finger 520..540 CDD:275368 5/21 (24%)
C2H2 Zn finger 548..568 CDD:275368 2/19 (11%)
zf-H2C2_2 560..583 CDD:290200 4/22 (18%)
C2H2 Zn finger 576..596 CDD:275368 4/28 (14%)
zf-H2C2_2 588..612 CDD:290200 5/32 (16%)
C2H2 Zn finger 604..624 CDD:275368 7/19 (37%)
zf-H2C2_2 617..640 CDD:290200 11/22 (50%)
C2H2 Zn finger 632..652 CDD:275368 7/19 (37%)
zf-H2C2_2 644..669 CDD:290200 9/28 (32%)
C2H2 Zn finger 660..680 CDD:275368 8/19 (42%)
zf-H2C2_2 672..697 CDD:290200 8/12 (67%)
C2H2 Zn finger 688..708 CDD:275368
zf-H2C2_2 701..723 CDD:290200
C2H2 Zn finger 716..736 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.