DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment salm and ZNF268

DIOPT Version :9

Sequence 1:NP_723670.2 Gene:salm / 34569 FlyBaseID:FBgn0261648 Length:1365 Species:Drosophila melanogaster
Sequence 2:NP_001159353.1 Gene:ZNF268 / 10795 HGNCID:13061 Length:947 Species:Homo sapiens


Alignment Length:958 Identity:174/958 - (18%)
Similarity:253/958 - (26%) Gaps:430/958 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   427 SMADDFAFGEKSGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTK 491
            |..|.....:|:..|:   :|:.   |..|||.||..|.|.||.|.||||:|::||.|...|.||
Human   370 SRKDQLVSHQKTHSGQ---KPYV---CNECGKAFGLKSQLIIHERIHTGEKPYECNECQKAFNTK 428

  Fly   492 GNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPTDSSPNHSPAPPPLGSAPASFPPA 556
            .||.||.:.|..:.|:|..:.    .....|...|:                            .
Human   429 SNLMVHQRTHTGEKPYVCSDC----GKAFTFKSQLI----------------------------V 461

  Fly   557 FPGLQNLYRPPMEILKSLGAAAPHQYF-PQELPTDLRKPSPQLDEDEPQVKNE-----------P 609
            ..|:....:|...|....|.:...|.. .|...|.::          |.|.||           .
Human   462 HQGIHTGVKPYGCIQCGKGFSLKSQLIVHQRSHTGMK----------PYVCNECGKAFRSKSYLI 516

  Fly   610 VEEKDQREEHEQEMAECSEPEPEPLPLEVRIKEERVEEQEQVKQEDHRIEPRRTPSPSSEHRSPH 674
            :..:....|...|...|.:        ....|.:.:..| ::...::..|........|......
Human   517 IHTRTHTGEKLHECNNCGK--------AFSFKSQLIIHQ-RIHTGENPYECHECGKAFSRKYQLI 572

  Fly   675 HHRHSHMGYPPV-------VQPIQPAALMHPQSSPGSQSHLDHLPTPGQLPPREDFFAERFPLNF 732
            .|:.:|.|..|.       ...::...::|.::..|                .:.|........|
Human   573 SHQRTHAGEKPYECTDCGKAFGLKSQLIIHQRTHTG----------------EKPFECSECQKAF 621

  Fly   733 TTAKMLSPEHHSPVRSPAGGALPPGVPPPPHHHPHHMARSPFFNPIKHEMAALLPRPHSNDNSWE 797
            .|..                                       |.|.|:......:|:|.:...:
Human   622 NTKS---------------------------------------NLIVHQRTHTGEKPYSCNECGK 647

  Fly   798 NFIEVSNTCETMKLKELMKNKKIS---DPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGR 859
            .|        |.| .:|:.:|.:.   .|..|..|.:..|.||.|.:|.|:|||.:|:.|..||:
Human   648 AF--------TFK-SQLIVHKGVHTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPYGCSECGK 703

  Fly   860 AFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIR 924
            ||.:|..|..||..|....|    |:|..|.|.:|....|..|.|:||||               
Human   704 AFRSKSYLIIHMRTHTGEKP----HECRECGKSFSFNSQLIVHQRIHTGE--------------- 749

  Fly   925 DPPPSMMPGHFMNPFAAA----AF------------HFGALPGGPGGPPGPNHGAHNGALGSESS 973
                        ||:..:    ||            |.|..|.|..                   
Human   750 ------------NPYECSECGKAFNRKDQLISHQRTHAGEKPYGCS------------------- 783

  Fly   974 QGDMDDNMDCGEDYDDDVSSE-----HLSNSNLEQEGDRSRSGDDF--KSLLFEQKLRIDATGVV 1031
                    :||:.:    ||:     |:...:.|:..:.:..|..|  ||||.            
Human   784 --------ECGKAF----SSKSYLIIHMRTHSGEKPYECNECGKAFIWKSLLI------------ 824

  Fly  1032 NTNPVRPRSSASSHGHSVGSTSAPTSPSVHASSQVIKRSSSPARSEASQGALDLTPRAAPTSSSS 1096
                |..|            |.|..:|  :..||..|..|         |.|.|           
Human   825 ----VHER------------THAGVNP--YKCSQCEKSFS---------GKLRL----------- 851

  Fly  1097 SRSPLPKEKPVSPPSLPRSPSGSSHASANILTSPLPPTVGIDCLPPGLQHHLQQQHQHLMQQQAA 1161
                                                               |..|..|..::...
Human   852 ---------------------------------------------------LVHQRMHTREKPYE 865

  Fly  1162 VAAAAAAQHHHHQQMAALHQHQEQLRREAAEAQQKAAAAAAAAAAAAAAQRQTPPQARDQRQEGG 1226
            .:....|...:.|.:  :|                                        ||...|
Human   866 CSECGKAFIRNSQLI--VH----------------------------------------QRTHSG 888

  Fly  1227 PGAGPPPNPLMGARPPFGMFPNLPLFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTC 1291
                         ..|:|                                              |
Human   889 -------------EKPYG----------------------------------------------C 894

  Fly  1292 GICYKTFPCHSALEIHYRSHTKERPFKCSICDRGFTTKGNLKQHMLTH 1339
            ..|.|||...|.|..|.|:||.|:|.||:.|.:.|..|..|..|..||
Human   895 NECGKTFSQKSILSAHQRTHTGEKPCKCTECGKAFCWKSQLIMHQRTH 942

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
salmNP_723670.2 zf-C2H2 451..473 CDD:278523 11/21 (52%)
C2H2 Zn finger 453..473 CDD:275368 11/19 (58%)
zf-H2C2_2 465..490 CDD:290200 13/24 (54%)
C2H2 Zn finger 481..501 CDD:275368 10/19 (53%)
C2H2 Zn finger 826..846 CDD:275368 8/19 (42%)
zf-H2C2_2 838..863 CDD:290200 12/24 (50%)
zf-C2H2_2 854..922 CDD:289522 23/67 (34%)
C2H2 Zn finger 854..874 CDD:275368 9/19 (47%)
C2H2 Zn finger 886..906 CDD:275368 7/19 (37%)
C2H2 Zn finger 1291..1311 CDD:275368 9/19 (47%)
zf-H2C2_2 1303..1328 CDD:290200 11/24 (46%)
C2H2 Zn finger 1319..1339 CDD:275368 6/19 (32%)
ZNF268NP_001159353.1 KRAB 81..141 CDD:214630
KRAB 81..120 CDD:279668
C2H2 Zn finger 278..298 CDD:275368
C2H2 Zn finger 306..326 CDD:275368
C2H2 Zn finger 334..354 CDD:275368