DRSC/TRiP Functional Genomics Resources

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Protein Alignment salm and znf516

DIOPT Version :10

Sequence 1:NP_723670.2 Gene:salm / 34569 FlyBaseID:FBgn0261648 Length:1365 Species:Drosophila melanogaster
Sequence 2:NP_001153141.1 Gene:znf516 / 100003866 ZFINID:ZDB-GENE-060503-194 Length:1084 Species:Danio rerio


Alignment Length:1160 Identity:230/1160 - (19%)
Similarity:350/1160 - (30%) Gaps:387/1160 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   446 EPFFK-------------HRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVH 497
            |||.|             |.|..||:.|...|:|..|:|.||||:|:||..|..|...||:||.|
Zfish    12 EPFSKGGHDNPDVKKSRGHTCELCGRSFPFLSSLSQHMRKHTGEKPYKCPHCEHRSAQKGSLKAH 76

  Fly   498 FQRHAQKFPHVPMNATPIPEHMDKFH------PPLLDQ---MSPTDSS-------PNHSPAPPPL 546
            .:.|  |...:..:.....|.||:..      |.  ||   .|||:|:       ..........
Zfish    77 IRSH--KLDGLSQSGGGEEEDMDEEGEKEGGVPE--DQGSCSSPTESTSACNKVVSGEDATKMRK 137

  Fly   547 GSAPASFPPAFPGLQ----NLYRPPMEILKSLGAAAPHQYFPQELPTDLR---KPSPQLDEDEPQ 604
            .|......|...|.|    :|.|      |.|...|..:...|||...||   .|.....||:.|
Zfish   138 KSGKKERIPGESGKQSVQCSLCR------KRLSGQAELEKHMQELHKVLRCELCPYETQQEDQLQ 196

  Fly   605 V---KNEPVEEKDQREE-------------HEQEMAECSEPEPEPLPLEVRIKEERVEEQEQVKQ 653
            .   |:.|.:|:...:|             .|....:|.:...:...|:..:|:.:       ..
Zfish   197 AHVEKDHPSDEESITKEVSTSEETDGILGKGEFPCEQCDQVFTQAWCLKTHMKKHQ-------NS 254

  Fly   654 EDH--RIEPRRTPSP--SSEHRSPHHHR---HSHMGYPPVVQPI--------------------- 690
            .||  ||..||...|  ...|...|:.:   .|:...|..|..:                     
Zfish   255 MDHGCRICGRRFREPWFLRSHMKTHNTKVKPRSNSYLPATVNEVAQDESNLVNEVCLYELCAKCG 319

  Fly   691 -----QPAALMHPQSSPGSQSHLDHLPTPGQLPPREDFFAERFPLNFTTAKMLSPEHHSPVRSPA 750
                 :.:..:|.|.....:..|.:...      .|:.|......:|.....|.|..:  :.:|:
Zfish   320 NFFHDRKSLQLHEQVHKNIEQPLKNKNC------NENNFPSVTKTSFLQCLNLKPAGN--IENPS 376

  Fly   751 GGALPPGVPPPPHHHPHHMARSPFFNPIKHEMA------ALLPRPHSNDNSWENFIEVSNTCETM 809
            .|.:.              .|.|..:|:....|      ..|.........||..:..::.....
Zfish   377 EGTIG--------------KRIPELDPVSSYQAWQLATRGKLVEVTERSQGWEERLADADVAYDR 427

  Fly   810 KLKELM-----KNKKISDPNQCVVCDR-----VLSC----KSALQMHYRTHTGER---------- 850
            :..|.:     |.||..|....:...:     ...|    .|..:.:....||||          
Zfish   428 EKGEYVLLRQDKRKKSLDSTVSIPTKKRRGAVTQGCTPDQHSNGEKNSHVSTGERSPENLSDSEY 492

  Fly   851 -------------PFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQH 902
                         ..:|..||:.|.|:..:..||.:.               |......:.....
Zfish   493 RPTSRPSRKNSQKTSECLECGKGFRTQQQMVIHMLIR---------------HGGLGETIGGNGL 542

  Fly   903 IRLHTGEP---------------------TDLTPEQIQAAEIRDPPPSMMPGHFMNPFAAAAFHF 946
            .|..|..|                     ||..|...:..:.....||.:..|.....:|..   
Zfish   543 FRKTTSSPSKTGESAGHFRDQRRAGFLGDTDKKPYTCEHCDFCTSEPSAIAAHIQTHQSAVR--- 604

  Fly   947 GALPGGPGGPPGPNHGAHNGALGSESSQGDMDDNMDCG----------EDYDDDVSSEH-----L 996
                         :.|..:.||.|..||.........|          :.|....:|.|     |
Zfish   605 -------------DWGQRSDALTSSLSQSQTHQTNHTGFPRLRNALLQQPYWPYTTSTHLERAAL 656

  Fly   997 SNSNLEQEGDRSR------SGDDFKSLLFEQKLRID----ATGVVNTNPVR---PRSSASSH--- 1045
            |::.|:.|.::|:      |.|..:|.|....:.:|    .:.::..|.||   |..|.::|   
Zfish   657 SDAALKTEEEKSKGLEESSSTDKAESNLLNLSVDVDNKKEVSSILLNNLVRHQCPYCSYATHYPE 721

  Fly  1046 --------GHSVGSTSAPTSPSVHASSQVIKRSSSPARSEASQGALDLTPRAAPTSSSSSRSPLP 1102
                    .|.:.||:                               |.|:.||.:.......|.
Zfish   722 VLWIHQRIAHKIDSTT-------------------------------LVPKWAPKNGLKGPKTLL 755

  Fly  1103 --KEKPVSPPSL-----PRSPSGSSHASANILTSPLPPTVGIDCLPPG------LQHHLQQQHQH 1154
              |.:...||.|     |..|...|:.::       ||    ||.|.|      |...::.....
Zfish   756 DFKRRTGPPPFLEGKDCPSLPQMRSYRTS-------PP----DCSPGGTKKSKPLTSTVESSSSQ 809

  Fly  1155 LMQQQAAVAAAAAAQHHHHQ-------QMA-ALHQ---HQEQLRREAAEAQQ----KAAAAAAAA 1204
            ......|.|..|::....|:       ::| :.|:   ||....|..|..|:    |..:....:
Zfish   810 NKSWHTATAPGASSHSSKHKTSKSRTDELAGSKHKTDIHQNNSSRPMASPQKTGNPKTGSRVVES 874

  Fly  1205 A---------------------AAAAAQRQTPPQARDQRQEGGPGAGPPPNPLMGARPPFGMFPN 1248
            :                     ::.|...|||.::..|.|:....||..|...:|...|      
Zfish   875 SLLPQEGLHFMLSSKHNLSDQRSSKAHAPQTPSKSDSQAQDTPSVAGYDPWNRLGLSGP------ 933

  Fly  1249 LPLFPPATTQNMCNAMNQIAQSVMPAAPF----NP---------------------LALSG-VRG 1287
               .|.:.::....|..  |:.|.....|    ||                     ||.|| .:|
Zfish   934 ---SPHSQSKRQSTADG--AEGVTDILSFLKNCNPHDLAALYHHWGYSSAMTEQAGLARSGSQQG 993

  Fly  1288 STTCGICYKTFPCHSALEIHYRSHTKERPFKCSICDRGFTTKGNLKQHMLT-HKI 1341
            ...|.:|.|:|...|....|.||||.||||:|..|....:.|||||.|:.| |::
Zfish   994 EYVCPVCRKSFNQPSHYRTHMRSHTGERPFQCRYCPYSASQKGNLKTHVQTVHRL 1048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salmNP_723670.2 SUF4-like 450..520 CDD:411020 27/82 (33%)
C2H2 Zn finger 453..474 CDD:411020 8/20 (40%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
C2H2 Zn finger 481..501 CDD:411020 8/19 (42%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
SUF4-like 826..>876 CDD:411020 13/81 (16%)
C2H2 Zn finger 826..847 CDD:411020 2/29 (7%)
C2H2 Zn finger 826..846 CDD:275368 2/28 (7%)
C2H2 Zn finger 854..874 CDD:411020 7/19 (37%)
C2H2 Zn finger 854..874 CDD:275368 7/19 (37%)
C2H2 Zn finger 886..906 CDD:275368 2/19 (11%)
SUF4-like 1291..>1341 CDD:411020 24/50 (48%)
C2H2 Zn finger 1291..1312 CDD:411020 8/20 (40%)
C2H2 Zn finger 1291..1311 CDD:275368 7/19 (37%)
zf-C2H2 1317..1339 CDD:395048 10/22 (45%)
C2H2 Zn finger 1319..1339 CDD:411020 9/20 (45%)
C2H2 Zn finger 1319..1339 CDD:275368 9/20 (45%)
znf516NP_001153141.1 zf-C2H2 30..52 CDD:395048 9/21 (43%)
C2H2 Zn finger 32..52 CDD:275368 8/19 (42%)
zf-H2C2_2 44..69 CDD:463886 12/24 (50%)
C2H2 Zn finger 60..80 CDD:275368 8/19 (42%)
C2H2 Zn finger 231..251 CDD:275368 3/19 (16%)
C2H2 Zn finger 259..279 CDD:275368 6/19 (32%)
zf-C2H2 995..1017 CDD:395048 7/21 (33%)
C2H2 Zn finger 997..1017 CDD:275368 7/19 (37%)
zf-H2C2_2 1009..1034 CDD:463886 11/24 (46%)
C2H2 Zn finger 1025..1046 CDD:275368 9/20 (45%)

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