DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment salr and SALL4

DIOPT Version :10

Sequence 1:NP_523548.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:NP_065169.1 Gene:SALL4 / 57167 HGNCID:15924 Length:1053 Species:Homo sapiens


Alignment Length:1174 Identity:307/1174 - (26%)
Similarity:464/1174 - (39%) Gaps:366/1174 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 DADSNNNGTEPQMEAEAVPESDTERETAEERGEEQEPENSNEALDLSLISSGGRESLPGSGHVSL 115
            |....|.|:...|:.:  |::::......|......|:      |:|.::.|    ...:.:|:|
Human   131 DCHRENGGSSEDMKEK--PDAESVVYLKTETALPPTPQ------DISYLAKG----KVANTNVTL 183

  Fly   116 EALQHTKVAVAQFAATAMAGNHQSAD-LAMVQSTIFNVQRQHLMQLQLIQHLQSQ--------LK 171
            :||:.|||||.|.:|.|:......|: :..|...|..:|:|.|.|:||.:.::.|        |.
Human   184 QALRGTKVAVNQRSADALPAPVPGANSIPWVLEQILCLQQQQLQQIQLTEQIRIQVNMWASHALH 248

  Fly   172 RAEAAA-----LGRHSHSDEEEEEPEPEPEPKKQPTNGLKEELELEQGPESEQDQESRREENSKT 231
            .:.|.|     ||.|.   .::.........:|..:.||..: .|:|......:..|.....|. 
Human   249 SSGAGADTLKTLGSHM---SQQVSAAVALLSQKAGSQGLSLD-ALKQAKLPHANIPSATSSLSP- 308

  Fly   232 DKRGTEDRKAEPEGYQSMMCDISSSLASSIITNHDPPPAPNEPNCLEMLQRRTEEVLDSASQ--- 293
               |......:|:|.: ::.::.|.|.|:::        |..|..:......:...||::.:   
Human   309 ---GLAPFTLKPDGTR-VLPNVMSRLPSALL--------PQAPGSVLFQSPFSTVALDTSKKGKG 361

  Fly   294 ---SLHAAQMQEEYSEYASKEAQSRGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCG 355
               ::.|..:          :.:....::||:||||.|:||:.|:||||||||||||||||:|||
Human   362 KPPNISAVDV----------KPKDEAALYKHKCKYCSKVFGTDSSLQIHLRSHTGERPFVCSVCG 416

  Fly   356 SKFTTKGNLKVHYQRHTQIFPPMLLPPGVAPNVGHSGQGQV-QGEQYPIRLPFAPPVAPVGQEQH 419
            .:||||||||||:.||.|:        ...|.:....|.:| .|...|..|....|:    .|..
Human   417 HRFTTKGNLKVHFHRHPQV--------KANPQLFAEFQDKVAAGNGIPYALSVPDPI----DEPS 469

  Fly   420 QNQVEEPEEIRQEIPVPQAEDLSKPMVKEKEKSHSPVERVKTPKEVKTDAALPS----SEKPEKE 480
            .:...:|..:...:.:||  :||..               ..||:: |..:||.    ...||.|
Human   470 LSLDSKPVLVTTSVGLPQ--NLSSG---------------TNPKDL-TGGSLPGDLQPGPSPESE 516

  Fly   481 ISK------PVVTSSRRNGSVRKRQTSAVSPPQEDRERDLVEHLHIAKLVRRSSASRESQPAEYS 539
            ...      |...|.|..|.    |.|....|                                 
Human   517 GGPTLPGVGPNYNSPRAGGF----QGSGTPEP--------------------------------- 544

  Fly   540 LAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHT 604
                                .|||.||||||:||:...||||:|:.|.:|:||:|||:||.||||
Human   545 --------------------GSETLKLQQLVENIDKATTDPNECLICHRVLSCQSSLKMHYRTHT 589

  Fly   605 GERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIHTMDDGS 669
            |||||:||||||||:||||||.|:.:|:....:::|..||:|.:||:|.::||||||:|     .
Human   590 GERPFQCKICGRAFSTKGNLKTHLGVHRTNTSIKTQHSCPICQKKFTNAVMLQQHIRMH-----M 649

  Fly   670 GGQ--GAP-AANPGE---AERLGIEDQNSNKSLGTSDTLDFSTTISDHSGQRSESSQGGDFDEFM 728
            |||  ..| ..||.:   :|.:.:.:..|..::...|.:: |..:.:.|.|.:.|          
Human   650 GGQIPNTPLPENPCDFTGSEPMTVGENGSTGAICHDDVIE-SIDVEEVSSQEAPS---------- 703

  Fly   729 TMDSTDDSRDNSSAATATPHPLERERDREKERERRIPNDCSDERSHS-NPDLTGGRSESGEMPAM 792
                       ||:...||.|                      ..|| :|.|......|.:.|..
Human   704 -----------SSSKVPTPLP----------------------SIHSASPTLGFAMMASLDAPGK 735

  Fly   793 DLSSP-------SSNSGRIFATGLANGAAGGGSGNGGLPMLG----MPMPPNLLLMAAAREEMHA 846
            ...:|       |..:|.:.:.||.|.::.         ::|    ....|::|...:       
Human   736 VGPAPFNLQRQGSRENGSVESDGLTNDSSS---------LMGDQEYQSRSPDILETTS------- 784

  Fly   847 LGHAHAKFPLLPFGPLGFMGLHPPPNVCNLCFKMLPSLAALESHLQSEHAKEPATGHAQRPQCSD 911
                             |..|.|                 ..|..:|..:|.|           |
Human   785 -----------------FQALSP-----------------ANSQAESIKSKSP-----------D 804

  Fly   912 AGSPYGAKLTLNPNLFAKKPPSSSSSSSGEKLPESSNPPFPAENPPATPIK-EDPDQEQLMVEEG 975
            |||                 .:.||.:|..::...|:.|......|.|.:| |.|          
Human   805 AGS-----------------KAESSENSRTEMEGRSSLPSTFIRAPPTYVKVEVP---------- 842

  Fly   976 ASAGEGSGTGATSNYPQEAGDAEQSLMKMQLHAHRFPASPLDFQQALMSAGPPTSSLDPPVNNKH 1040
                 |:..|.::..|.                          ...|::|.|...:      .:|
Human   843 -----GTFVGPSTLSPG--------------------------MTPLLAAQPRRQA------KQH 870

  Fly  1041 FCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSL 1105
            .|..|.:||||:||||||.|||||:|||.||:|.:|||||||||||..||...|.::||||::::
Human   871 GCTRCGKNFSSASALQIHERTHTGEKPFVCNICGRAFTTKGNLKVHYMTHGANNNSARRGRKLAI 935

  Fly  1106 ELPMRPGPNSGQGHPGSSAEQEFMQR--------RPELFFPYLPPFFNGLPPKPGELS---PGAF 1159
            |..|     :..|..|....:.|.:.        .|.::..|......||..|..|:|   .|..
Human   936 ENTM-----ALLGTDGKRVSEIFPKEILAPSVNVDPVVWNQYTSMLNGGLAVKTNEISVIQSGGV 995

  Fly  1160 PNIP 1163
            |.:|
Human   996 PTLP 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_523548.1 SUF4-like 320..>371 CDD:411020 39/50 (78%)
C2H2 Zn finger 323..344 CDD:411020 15/20 (75%)
C2H2 Zn finger 323..343 CDD:275368 14/19 (74%)
C2H2 Zn finger 351..371 CDD:411020 14/19 (74%)
C2H2 Zn finger 351..371 CDD:275368 14/19 (74%)
SUF4-like 583..>636 CDD:411020 35/52 (67%)
C2H2 Zn finger 583..604 CDD:411020 12/20 (60%)
C2H2 Zn finger 583..603 CDD:275368 11/19 (58%)
zf-H2C2_2 595..620 CDD:463886 21/24 (88%)
C2H2 Zn finger 611..631 CDD:411020 15/19 (79%)
C2H2 Zn finger 611..631 CDD:275368 15/19 (79%)
C2H2 Zn finger 643..663 CDD:275368 12/19 (63%)
lambda-1 1013..>1061 CDD:212564 16/47 (34%)
SUF4-like 1039..>1087 CDD:411020 34/47 (72%)
C2H2 Zn finger 1042..1063 CDD:411020 14/20 (70%)
C2H2 Zn finger 1042..1062 CDD:275368 13/19 (68%)
C2H2 Zn finger 1070..1090 CDD:275368 14/19 (74%)
C2H2 Zn finger 1070..1087 CDD:411020 13/16 (81%)
SALL4NP_065169.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..149 5/19 (26%)
SUF4-like 381..>429 CDD:411020 38/47 (81%)
C2H2 Zn finger 384..405 CDD:411020 15/20 (75%)
C2H2 Zn finger 384..404 CDD:275368 14/19 (74%)
C2H2 Zn finger 412..432 CDD:275368 14/19 (74%)
C2H2 Zn finger 412..429 CDD:411020 13/16 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..546 19/137 (14%)
C2H2 Zn finger 568..588 CDD:275368 11/19 (58%)
zf-H2C2_2 580..605 CDD:463886 21/24 (88%)
C2H2 Zn finger 596..619 CDD:275368 16/22 (73%)
zf-C2H2 626..648 CDD:395048 12/21 (57%)
C2H2 Zn finger 628..648 CDD:275368 12/19 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..714 8/62 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 736..776 7/48 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 788..828 15/84 (18%)
SUF4-like 872..>919 CDD:411020 34/46 (74%)
C2H2 Zn finger 872..893 CDD:411020 14/20 (70%)
C2H2 Zn finger 872..892 CDD:275368 13/19 (68%)
C2H2 Zn finger 900..920 CDD:275368 14/19 (74%)
C2H2 Zn finger 900..919 CDD:411020 14/18 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1018..1039
Blue background indicates that the domain is not in the aligned region.

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