DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment salr and sall2

DIOPT Version :9

Sequence 1:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:XP_017207469.2 Gene:sall2 / 568044 ZFINID:ZDB-GENE-030829-32 Length:1254 Species:Danio rerio


Alignment Length:1164 Identity:267/1164 - (22%)
Similarity:424/1164 - (36%) Gaps:377/1164 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LAMVQSTIFNVQRQHLMQLQLIQHLQSQLKRAEAAALGRHSHSDEE---------------EEEP 191
            :|.:...:..:|::.:.|:|:.:.:..|:.|..    |.....|.:               :..|
Zfish   190 IAFILEELRVLQQRQIHQMQMTEEICRQVLRLG----GGPCEVDSKPCILPSLPQFCLKGSDNNP 250

  Fly   192 EPEPEPKKQPTNGLKEELELEQG---PESEQDQES----RREENSKTDKRGTEDRKAEPEGYQSM 249
            .|.......|.:.:...|.....   |:|.:....    .|...::.|...|     .|..|.| 
Zfish   251 RPSRPKSSSPPSSVAPLLACFSSLLPPQSSKHSNPLLNVLRPHKAQYDSVVT-----TPTNYTS- 309

  Fly   250 MCDISSSLASSIITNHDPPPAPNEPNCLEM---LQRRTEEV-------LDSASQSLHAAQMQEEY 304
              ..|:|.:||:.|    |.|.|.|..|.:   .|:.:...       |...:|||..|.:....
Zfish   310 --HTSASTSSSMST----PVASNYPLTLSLGLPTQKSSNTTGASGHSGLPFQNQSLPVAAVPSGP 368

  Fly   305 SEYASKEAQSRGEI-----FKHRCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNL 364
            |:.....||:...:     .:|.|::|.|:|.|.|:|||||||||||||:.|.||.|:|||:|||
Zfish   369 SQDLKLSAQAGSSVLSSGRMQHACRFCRKLFSSDSSLQIHLRSHTGERPYQCPVCFSRFTTRGNL 433

  Fly   365 KVHYQRHTQ--------IFPPMLLPPGVAPNVGHSGQGQVQGEQYPIRLPFAPPVAPVG---QEQ 418
            |||:.||.:        :||..|.......::|.|.|.|.              |....   .::
Zfish   434 KVHFLRHREQNPELSFSLFPCSLFASVTGGSMGGSAQTQT--------------VTSTNTNTTQR 484

  Fly   419 HQNQVEEP---EEIRQEIPVPQAEDLSKPM---VKEKEKSHSPVE-------RVKTPKEVKTDAA 470
            ||.|.::.   :.:.......:|...|.|.   :.....:||.::       .........|.::
Zfish   485 HQKQQDDDLCVDSLEGATASTRATASSLPPSIDLALLTTAHSLLQLNCAAAAAAAAAASTSTTSS 549

  Fly   471 LPSSEKPEKE---ISKPVVTSSRRNG---SVRKRQTSAVSPPQEDRERDLVEH------LHIAKL 523
            :.||......   :|.|..::|...|   .|::::....:||..    .|:.|      .::.|:
Zfish   550 ITSSSSSSLASTLLSSPASSTSSIAGVYKGVKQQRFDENTPPIP----TLLPHTAYSQLANLPKI 610

  Fly   524 VRRSSAS---------RESQPAEYSLAQMERII-----DKSWEDLIEIDKTSETSKLQQLVDNIE 574
            ...:|:|         |.:.||...|...:..|     ..|....|. ..||:|||||:||:.:|
Zfish   611 FFPASSSHHHLGHGFLRPTTPAGSFLPSPQHHITFPFTSSSTAPSIS-TPTSDTSKLQRLVEKLE 674

  Fly   575 ------------------------------------------NKLTD------------------ 579
                                                      |.:|.                  
Zfish   675 KEPHGQTNWESSIGETSTSGNSVSGTLTYSSSGLMSTSTYSTNVVTSLPSSTVQIPSSLFSKESP 739

  Fly   580 ------------PNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHK 632
                        ||||..|.:|:||..:|::|..||.|||||.||:|||:|:|||:|:||::.|:
Zfish   740 YMGLMNSAGTLAPNQCSVCLRVLSCPRALRLHQATHLGERPFPCKLCGRSFSTKGSLRAHLATHR 804

  Fly   633 IKPP-MRSQFKCPVCHQKFSNGIILQQHIRIHTMDDGSGGQGAPAANPGEAERLGIEDQNSNKSL 696
            .:|| .|:|..||:|.:||:|.::||.|||:|.     |||..|...|..:..  .:.|:.::|:
Zfish   805 ARPPNSRAQNSCPLCQRKFTNALVLQHHIRMHL-----GGQLPPEHMPDTSTE--CDSQSHSQSI 862

  Fly   697 GTSDTLDFSTTISD---HSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREK 758
            ..|.:.:..:|:..   |:.:::.|               |.|...|.|.:..            
Zfish   863 EPSGSENTPSTVDVQLLHADRQTIS---------------DSSHTESLAVSIA------------ 900

  Fly   759 ERERRIPNDCSDERSHSNPDLTGGRSESGEMPAMDLS-SPSSN-SGRIFATGLANGAAGGGSGNG 821
                  |..|....|     |...|| ||.:||.||| .||.| :.:...|.:|:          
Zfish   901 ------PTVCPVTSS-----LPASRS-SGPIPAFDLSPGPSLNLTPQSPPTFIAD---------- 943

  Fly   822 GLPMLGMPMPPNLLLMAAAREEMHALGHAHAKFPLLPFGPLGFMGLHPPPNVC----------NL 876
                     ||.|.|...:..|..|                   .|.||.:..          .:
Zfish   944 ---------PPELSLNIPSPVESAA-------------------SLFPPTSQSASTSGTTANDEV 980

  Fly   877 CFKM---------LPSLAALESHLQSEHAKE----------PATG--------------HAQRPQ 908
            ||::         :.|.:||.:....|:..|          |.:|              :|.|..
Zfish   981 CFELSSNTAYLGDISSTSALMNTSPQENDCEVSENRSLSAVPCSGSRSNLEDLLSIQAHNASRAS 1045

  Fly   909 CSDAGSPYGAKLTL------NPNLFAKKPPSSSSSSSGEKLPESSNPPFPAE------------N 955
            .:...||..:.|.|      :.|:..::|..|...:| :.||:.    ||.|            |
Zfish  1046 RTHPVSPPSSPLVLRSESVSSQNVRLEEPDQSLVQTS-KSLPQE----FPNEQKTEDKGRKTPKN 1105

  Fly   956 PPATPIKEDPDQEQLMVEEGASAGEGSGTGATSNYPQEAGDAEQSLMKMQLHAHRFPASPLDFQQ 1020
            ...||.:...||:.|          ......||....|:.:|:..:.|:....| |.:..:| :.
Zfish  1106 GQKTPPELSTDQDML----------SDTVTKTSEDAVESEEADTHVQKITKDTH-FSSDAMD-KA 1158

  Fly  1021 ALMSAGPP-------------TSSLDPPVNNK--HFCHVCRRNFSSSSALQIHMRTHTG 1064
            .|..|...             |.||.||:..|  :.|..|.:.::|.|.|:.||:.|.|
Zfish  1159 DLNDATATEIDRTEPTVCISLTPSLPPPMPEKKIYHCSECGKEYASRSGLKGHMKHHGG 1217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 13/21 (62%)
C2H2 Zn finger 323..343 CDD:275368 12/19 (63%)
zf-H2C2_2 335..360 CDD:290200 18/24 (75%)
C2H2 Zn finger 351..371 CDD:275368 13/19 (68%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
zf-H2C2_2 595..620 CDD:290200 15/24 (63%)
C2H2 Zn finger 611..631 CDD:275368 12/19 (63%)
C2H2 Zn finger 643..663 CDD:275368 11/19 (58%)
lambda-1 1013..>1061 CDD:212564 16/62 (26%)
zf-C2H2 1040..1062 CDD:278523 7/21 (33%)
C2H2 Zn finger 1042..1062 CDD:275368 7/19 (37%)
zf-H2C2_2 1054..1079 CDD:290200 5/11 (45%)
C2H2 Zn finger 1070..1090 CDD:275368
sall2XP_017207469.2 C2H2 Zn finger 392..412 CDD:275368 12/19 (63%)
zf-H2C2_2 404..429 CDD:316026 18/24 (75%)
C2H2 Zn finger 420..440 CDD:275368 13/19 (68%)
C2H2 Zn finger 755..775 CDD:275368 7/19 (37%)
zf-H2C2_2 767..792 CDD:316026 15/24 (63%)
C2H2 Zn finger 783..803 CDD:275368 12/19 (63%)
C2H2 Zn finger 816..836 CDD:275368 11/19 (58%)
XPG_I <838..>1149 CDD:331126 77/404 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D130294at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23233
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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