DRSC/TRiP Functional Genomics Resources

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Protein Alignment salr and sall2

DIOPT Version :10

Sequence 1:NP_523548.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:XP_021323444.1 Gene:sall2 / 568044 ZFINID:ZDB-GENE-030829-32 Length:1254 Species:Danio rerio


Alignment Length:1145 Identity:251/1145 - (21%)
Similarity:413/1145 - (36%) Gaps:339/1145 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LAMVQSTIFNVQRQHLMQLQLIQHLQSQLKRAEAAALGRHSHSDEE---------------EEEP 191
            :|.:...:..:|::.:.|:|:.:.:..|:.|..    |.....|.:               :..|
Zfish   190 IAFILEELRVLQQRQIHQMQMTEEICRQVLRLG----GGPCEVDSKPCILPSLPQFCLKGSDNNP 250

  Fly   192 EPEPEPKKQPTNGLKEELELEQG---PESEQDQESRREENSKTDKRGTEDRKAEPEGYQSMMCDI 253
            .|.......|.:.:...|.....   |:|        .::|..........||:.:...:...:.
Zfish   251 RPSRPKSSSPPSSVAPLLACFSSLLPPQS--------SKHSNPLLNVLRPHKAQYDSVVTTPTNF 307

  Fly   254 SSSLASSIITNHDPPPAPNEPNCLEM---LQRRTEEV-------LDSASQSLHAAQMQEEYSEYA 308
            :|..::|..:....|.|.|.|..|.:   .|:.:...       |...:|||..|.:....|:..
Zfish   308 TSHTSASTSSAMSTPVASNYPLTLSLGLPTQKSSNTTGASGHSGLPFQNQSLPVAAVPSGPSQDL 372

  Fly   309 SKEAQSRGEI-----FKHRCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHY 368
            ...||:...:     .:|.|::|.|:|.|.|:|||||||||||||:.|.||.|:|||:||||||:
Zfish   373 KLSAQAGSSVLSSGRMQHACRFCRKLFSSDSSLQIHLRSHTGERPYQCPVCFSRFTTRGNLKVHF 437

  Fly   369 QRHTQ--------IFPPMLLPPGVAPNVGHSGQGQVQGEQYPIRLPFAPPVAPVG---QEQHQNQ 422
            .||.:        :||..|.......::|.|.|.|.              |....   .::||.|
Zfish   438 LRHREQNPELSFSLFPCSLFASVTGGSMGGSAQTQT--------------VTSTNTNTTQRHQKQ 488

  Fly   423 VEEP---EEIRQEIPVPQAEDLSKP-------------MVKEKEKSHSPVERVKTPKEVKTDAAL 471
            .::.   :.:.......:|...|.|             :::....:.:......:.....:..:.
Zfish   489 QDDDLCVDSLEGATASTRATASSLPPSIDLALLTTAHSLLQLNRAAAAAAAAAASTSTTSSITSS 553

  Fly   472 PSSEKPEKEISKPVVTSSRRNG---SVRKRQTSAVSPPQEDRERDLVEH------LHIAKLVRRS 527
            .||......:|.|..::|...|   .|::::....:||..    .|:.|      .::.|:...:
Zfish   554 SSSSLASTLLSSPASSTSSIAGVYKGVKQQRFDENTPPIP----TLLPHTAYSQLANLPKIFFPA 614

  Fly   528 SAS---------RESQPAEYSLAQMERII-----DKSWEDLIEIDKTSETSKLQQLVDNIE---- 574
            |:|         |.:.||...|...:..|     ..|....|. ..||:|||||:||:.:|    
Zfish   615 SSSHHHLGHGFLRPTSPAGSFLPSPQHHITFPFTSSSTAPSIS-TPTSDTSKLQRLVEKLEKEPH 678

  Fly   575 --------------------------------------NKLTD---------------------- 579
                                                  |.:|.                      
Zfish   679 GQTNWESSIGETSTSGNSVSGTLTYSSSGLMSTSTYSTNVVTSLPSSTVQIPSSLFSKESPYMGL 743

  Fly   580 --------PNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPP 636
                    ||||..|.:|:||..:|::|..||.|||||.||:|||:|:|||:|:||::.|:.:||
Zfish   744 MNSAGTLAPNQCSVCLRVLSCPRALRLHQATHLGERPFPCKLCGRSFSTKGSLRAHLATHRARPP 808

  Fly   637 -MRSQFKCPVCHQKFSNGIILQQHIRIHTMDDGSGGQGAPAANPGEAERLGIEDQNSNKSLGTSD 700
             .|:|..||:|.:||:|.::||.|||:|.     |||..|...|..:..  .:.|:.::|:..|.
Zfish   809 NSRAQNSCPLCQRKFTNALVLQHHIRMHL-----GGQLPPEHMPDTSTE--CDSQSHSQSIEPSG 866

  Fly   701 TLDFSTTISD---HSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREKERER 762
            :.:..:|:..   |:.:::.|               |.|...|.|.:..                
Zfish   867 SENTPSTVDVQLLHADRQTIS---------------DSSHTESLAVSIA---------------- 900

  Fly   763 RIPNDCSDERSHSNPDLTGGRSESGEMPAMDLS---------------------------SPSSN 800
              |..|....|     |...|| ||.:|..|||                           ||..:
Zfish   901 --PTVCPVTSS-----LPASRS-SGPIPTFDLSPGPSLNLTPQSPPTFIADPPELSLNIPSPVES 957

  Fly   801 SGRIFATGLANGAAGGGSGNGGLPMLGMPMPPNLLLMAAAREEMHA----LGHAHAKFPLLPFGP 861
            :..:|.....:.:..|.:.|..:..                 |:.:    ||...:...|     
Zfish   958 AASLFPPTSQSASTSGTTANDEVCF-----------------ELSSNTAYLGDISSTSAL----- 1000

  Fly   862 LGFMGLHPPPNVC----NLCFKMLP---SLAALES--HLQSEHAKEPATGHAQRPQCSDAGSP-- 915
               |...|..|.|    |.....:|   |.:.||.  .:|:.:|...:..|...|    ..||  
Zfish  1001 ---MNTSPQENDCEVSENRSLSAVPCSGSRSNLEDLLSIQAHNASRASRTHPVSP----PSSPLV 1058

  Fly   916 YGAKLTLNPNLFAKKPPSS---SSSSSGEKLPESSNPPFPAENPPATPIKEDP----DQEQLMVE 973
            .|::...:.|:..::|..|   :|:|..::.|............|....|..|    |||.|   
Zfish  1059 LGSESVSSQNVRLEEPDQSLVQTSTSLPQEFPNEQKTEDKGRKTPKNGQKIPPELSTDQEML--- 1120

  Fly   974 EGASAGEGSGTGATSNYPQEAGDAEQSLMKMQLHAHRFPASPL---DFQQAL---MSAGPP---- 1028
                   ......||....|:.:|:..:.|:....| :.:..:   |...|.   |....|    
Zfish  1121 -------SDTVTKTSEDAVESEEADTRVQKITKDTH-YSSDAMDKADLNDATATEMDRTEPTVCI 1177

  Fly  1029 --TSSLDPPVNNK--HFCHVCRRNFSSSSALQIHMRTHTG 1064
              |.||.||:..|  :.|..|.:.::|.|.|:.||:.|.|
Zfish  1178 SLTPSLPPPMPEKKIYHCSECGKEYASRSGLKGHMKHHGG 1217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_523548.1 SUF4-like 320..>371 CDD:411020 33/50 (66%)
C2H2 Zn finger 323..344 CDD:411020 13/20 (65%)
C2H2 Zn finger 323..343 CDD:275368 12/19 (63%)
C2H2 Zn finger 351..371 CDD:411020 13/19 (68%)
C2H2 Zn finger 351..371 CDD:275368 13/19 (68%)
SUF4-like 583..>636 CDD:411020 27/52 (52%)
C2H2 Zn finger 583..604 CDD:411020 8/20 (40%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
zf-H2C2_2 595..620 CDD:463886 15/24 (63%)
C2H2 Zn finger 611..631 CDD:411020 12/19 (63%)
C2H2 Zn finger 611..631 CDD:275368 12/19 (63%)
C2H2 Zn finger 643..663 CDD:275368 11/19 (58%)
lambda-1 1013..>1061 CDD:212564 17/61 (28%)
SUF4-like 1039..>1087 CDD:411020 10/28 (36%)
C2H2 Zn finger 1042..1063 CDD:411020 7/20 (35%)
C2H2 Zn finger 1042..1062 CDD:275368 7/19 (37%)
C2H2 Zn finger 1070..1090 CDD:275368
C2H2 Zn finger 1070..1087 CDD:411020
sall2XP_021323444.1 SUF4-like 392..>446 CDD:411020 34/53 (64%)
C2H2 Zn finger 392..413 CDD:411020 13/20 (65%)
C2H2 Zn finger 392..412 CDD:275368 12/19 (63%)
C2H2 Zn finger 420..440 CDD:411020 13/19 (68%)
C2H2 Zn finger 420..440 CDD:275368 13/19 (68%)
C2H2 Zn finger 755..775 CDD:275368 7/19 (37%)
zf-C2H2 781..803 CDD:395048 13/21 (62%)
C2H2 Zn finger 783..803 CDD:275368 12/19 (63%)
C2H2 Zn finger 816..836 CDD:275368 11/19 (58%)
rad2 <838..>1149 CDD:273166 70/390 (18%)
Blue background indicates that the domain is not in the aligned region.

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