DRSC/TRiP Functional Genomics Resources

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Protein Alignment salr and znf536

DIOPT Version :9

Sequence 1:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:XP_009301683.1 Gene:znf536 / 565481 ZFINID:ZDB-GENE-030616-624 Length:1485 Species:Danio rerio


Alignment Length:1323 Identity:256/1323 - (19%)
Similarity:425/1323 - (32%) Gaps:520/1323 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 EEEEEPEPEPEPKKQPTNGLKEELELEQGPESEQDQESRREENSKTDKRGTEDRKAEPEGYQSMM 250
            |.::.|.|.|.|.:           |......|.:...|.|::|..            .|..|::
Zfish     3 EGQQVPPPPPPPAR-----------LAGESPWECNTRLRMEDSSLC------------LGVSSVV 44

  Fly   251 CDISSSLASSIITNHDP----------------PPAPN-----EPNCLEMLQRRTEEVLD----S 290
            .|..:.|:::::....|                |...:     |......|..:|...|.    |
Zfish    45 SDADTHLSNAVLNGRYPISQKLHQLTAQLGHAFPELQSRQQIPEEKAATPLDEKTHAALASQPIS 109

  Fly   291 ASQSLHAAQMQEEYSEYASKEAQSRGEI-------------------------FKHRCKYCGKIF 330
            :..:|.|.|:..:....|......|.::                         .|:.|..|||.|
Zfish   110 SQMALLANQLNRDMDVGALSGLNGRVDLQQFLNGQNLGIMSQMNDIEDDARKNRKYPCPLCGKRF 174

  Fly   331 GSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLPPGVAPNVGHSGQGQ 395
            ...|.|.:|:|:||||:||.|..|..:...|||||:|.:.|               .:|:.|:|:
Zfish   175 RFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLKIHLRTH---------------KLGNLGKGR 224

  Fly   396 VQGEQYPIRLPFAPPVAPVGQEQHQNQ-VEEPEEIRQEIPVPQAEDLSKPMVKEKEKSHS----- 454
                               |:.:.:|: :.|.||              :.::::|:..:|     
Zfish   225 -------------------GRVREENRLLHELEE--------------RAILRDKQMRNSLLQPP 256

  Fly   455 ----PVERVKTPKEVKTDAA----LPSS--EKPEKEISKPVVTSSRRNGSVRKRQTSAVSPPQED 509
                |...::|..:.:..:|    .|:|  ..|| .:::|  ::|.:..|...:...|::|.|..
Zfish   257 QPLPPHLGIQTHSQQQPGSACGLLTPTSIGNSPE-GLTQP--SASPKPASNNLQDEQALNPAQGY 318

  Fly   510 RERDLVEHLHIAKLVRRSSASRESQPAEYSLAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIE 574
            |          ....:.....||      .|.:..||:.|                         
Zfish   319 R----------CTFCKGKFKKRE------ELDRHIRILHK------------------------- 342

  Fly   575 NKLTDPNQCIFCQKVMSCRSSLQMHI-RTH--------------TGERP---FRCKICGRAFATK 621
                 |.:|..|:...|....|..|: :||              .||:|   |||::||:.|:..
Zfish   343 -----PYKCTLCEFAASQEEDLISHVEKTHITAESAQGQGTGAGNGEKPSNEFRCEVCGQVFSQA 402

  Fly   622 GNLKAHMSIHKIKPPMRSQFK--CPVCHQKFSNGIILQQHIRIHT--------------MDDGSG 670
            ..||.||..||      ..|:  |.:|.::|.....|:.|:::|.              .||...
Zfish   403 WFLKGHMRKHK------DSFEHCCQICGRRFKEPWFLKNHMKVHLNKLAIKSKPPVGGGADDEGH 461

  Fly   671 GQGAPAANPGEA-------------------ERLGIEDQ------------NSNKSLGTSDTLDF 704
            ...:.::...||                   ::.|:.:|            ...:.||  ..|..
Zfish   462 AVNSMSSLAQEAHANLYSRYISCLQSGFLTPDKQGLAEQQHQMLAKAGIAMKEKEMLG--KLLSP 524

  Fly   705 STTISDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLE-------------RERD- 755
            ..::....|:..:.|..|..:....:.|:...|..::|..|...||.             .||. 
Zfish   525 MASMGHGLGENEKRSLLGCLNLVPPLKSSCMERLQAAAKVAEMDPLNSYQAWQIMARGMAMERSF 589

  Fly   756 REKERERRI---------------------------PNDCSDERSHSNPDLTGGRSESGEMPAMD 793
            ..||:...:                           .||.|..:.|  ||:..|...||.|    
Zfish   590 MPKEQHHGVHGQEDELANAAGIVPFGKDKPDHPTLGSNDGSKLKQH--PDVLHGVKTSGGM---- 648

  Fly   794 LSSPSSNSGRIFATGLANGAAGGGSGNGGLPMLGMPMPPNLLLMAAAREEMHALGHAHAKFPLLP 858
              .|..:.|..|                                           .:|.:|  ||
Zfish   649 --MPLKDEGLTF-------------------------------------------DSHREF--LP 666

  Fly   859 -FGPLGF-MGLHPPPNVCNLCFKMLPSLAALESHLQSEHAKEPATGHAQRPQCSDAGSPYGA--K 919
             .|.||. .||.             .|||:|         ||.||      :|.|.|..:..  :
Zfish   667 HHGGLGLGQGLE-------------YSLASL---------KEKAT------ECPDCGRVFRTYHQ 703

  Fly   920 LTLNPNLFAKKPPSSSSSSS---GEKLPESSNPPFPAENPPATPIKEDPDQEQLMVEEGASAGEG 981
            :.::..:..|...:...||.   .|:...:|:|...:.:...||...:      :.||..:.|..
Zfish   704 MVVHSRVHNKDRRTLEDSSQHILDERRGSASDPESQSISRSTTPGSSN------VTEESGAGGGH 762

  Fly   982 SGTGAT---SNYPQEAGDAEQSLMKMQLHAHRFPASPLDFQQALMSAGPPTSSLDPPV------- 1036
            |.||:.   |.:|..                  |:|.:..:.|     .|.|::.||.       
Zfish   763 SQTGSVQDDSPHPSS------------------PSSDVGDEMA-----KPVSAVQPPTTQHRDRS 804

  Fly  1037 --NNKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRR 1099
              ::...|..|.::|.:|..|::|:|.|||:||::|..|..|.|...:||.|:..|       .|
Zfish   805 VGSSMKDCPYCGKSFRTSHHLKVHLRIHTGEKPYRCPHCDYAGTQSASLKYHLERH-------HR 862

  Fly  1100 GRRMSLELPMRPGPNSGQGHPGSSAEQEFMQR---------RPELFFPYLPPFFNGLPPKPGELS 1155
            .|:..      .||::  .||.||..::...:         ||::    |...|.|:.|...:  
Zfish   863 ERQNG------SGPSA--NHPPSSEHKDDHNKNSGGTGVFARPDV----LRGVFKGMMPSGLD-- 913

  Fly  1156 PGAFPNIPPPPFANGGKYPY---PPGLLGFPGFLAQHPYILERRSSSKSPTPEP----------- 1206
                       |..|...|:   |||:|.        |...:|......|.|||           
Zfish   914 -----------FRGGQMLPHQWAPPGMLS--------PRDRDRERERHGPGPEPTTENMKSPEGP 959

  Fly  1207 ---AQSPALREEEG-------------SGNIW-----HPLSRIKVENNQNES-MGGFNEQEDHAE 1249
               |.|||...:.|             .|::.     ..||.:|.|....|| :.|.:..:::||
Zfish   960 GSAADSPASFSDLGRAYQSMVGNGVNFQGSLQAFMDSFVLSSMKKEKEMRESQLHGQHFSQENAE 1024

  Fly  1250 ------TDATGGDNDESESRDAE 1266
                  ::|...:|..|:.:.||
Zfish  1025 IKTKRSSEANQEENPTSDIKPAE 1047

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 9/21 (43%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
zf-H2C2_2 335..360 CDD:290200 11/24 (46%)
C2H2 Zn finger 351..371 CDD:275368 8/19 (42%)
C2H2 Zn finger 583..603 CDD:275368 5/20 (25%)
zf-H2C2_2 595..620 CDD:290200 13/42 (31%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 643..663 CDD:275368 5/19 (26%)
lambda-1 1013..>1061 CDD:212564 12/56 (21%)
zf-C2H2 1040..1062 CDD:278523 7/21 (33%)
C2H2 Zn finger 1042..1062 CDD:275368 7/19 (37%)
zf-H2C2_2 1054..1079 CDD:290200 11/24 (46%)
C2H2 Zn finger 1070..1090 CDD:275368 7/19 (37%)
znf536XP_009301683.1 COG5048 161..>215 CDD:227381 24/53 (45%)
C2H2 Zn finger 167..187 CDD:275368 9/19 (47%)
zf-H2C2_2 180..204 CDD:290200 11/23 (48%)
C2H2 Zn finger 195..215 CDD:275368 8/19 (42%)
C2H2 Zn finger 320..341 CDD:275368 5/26 (19%)
C2H2 Zn finger 346..367 CDD:275368 5/20 (25%)
C2H2 Zn finger 392..412 CDD:275368 8/19 (42%)
C2H2 Zn finger 420..440 CDD:275368 5/19 (26%)
zf-C2H2_assoc 715..789 CDD:293212 18/102 (18%)
COG5048 812..>891 CDD:227381 28/93 (30%)
C2H2 Zn finger 812..832 CDD:275368 7/19 (37%)
zf-C2H2 812..832 CDD:278523 7/19 (37%)
zf-H2C2_2 824..846 CDD:290200 10/21 (48%)
C2H2 Zn finger 840..860 CDD:275368 7/19 (37%)
C2H2 Zn finger 1410..1431 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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