DRSC/TRiP Functional Genomics Resources

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Protein Alignment salr and CG9650

DIOPT Version :9

Sequence 1:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:NP_001356899.1 Gene:CG9650 / 31660 FlyBaseID:FBgn0029939 Length:1254 Species:Drosophila melanogaster


Alignment Length:1443 Identity:291/1443 - (20%)
Similarity:424/1443 - (29%) Gaps:538/1443 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KELDADSNNNG----TEPQMEAEAVPESDTERETAEERGEEQEPENSNEALDLSLISSGGRESLP 108
            |.|..:..|.|    ..|||:.:|               ||..|        |||::.....|.|
  Fly    55 KVLQCNKENYGQCATQNPQMDRDA---------------EEGRP--------LSLVNRRPSISAP 96

  Fly   109 GSGHVSLEALQHTKVAVAQFAATAMAGNHQSADLAMV---------------QSTIFNVQRQHLM 158
            .||..|..|.....||.|..||.|.|....:|..:.:               .||          
  Fly    97 ISGRKSAPASAAAAVAAAAAAAAAAAAASSTASGSRIHTPPPSPADLLADGASST---------- 151

  Fly   159 QLQLIQH---------------LQSQLKRAEAAALGRHSHSDE--EEEEPEPEPEPKKQPTNG-L 205
            ..:|:..               |.|....:..||:.|.|..|.  |.||.:...:.:.||... :
  Fly   152 PKRLVDENDNTTPKDSETGATTLDSNAAPSSPAAIERQSSGDSSCEMEEQQDRQDKQSQPKQAKV 216

  Fly   206 KEELELEQGPESEQDQESRREEN------SKTDKRGTEDRKA-----EPEGYQSMMCDISSSLAS 259
            |:|...|:|....|:|:...:|.      :|..|....|.:|     ||..|....|....:.|.
  Fly   217 KQEPYDEEGVNHHQNQDDDDDEEMEERSLAKRPKMELVDAEANTVHTEPSNYTCSTCKTRYTSAW 281

  Fly   260 SIIT----NHDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKE-AQSRGEIF 319
            .:|.    :|........|.....|...|...|::::.:|.||......|..||.: |.|.....
  Fly   282 RLIQHVQHSHGVKIYVESPGGGATLTVATPAALNNSALALAAAAAAASASGLASPQPAVSPNPAV 346

  Fly   320 KHRCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNL-------------------- 364
            ....|....:..:.|.:.....|.|.....| |..|...:...::                    
  Fly   347 TSSAKRSSPLGAAGSTILSTSVSSTCSNSLV-NTSGGSISNTSSIGSPQQQQLQLQQQQAQQQQQ 410

  Fly   365 KVHYQ-------------RHTQIFPP-------------MLLPPG----------VAPNVG---- 389
            :|..|             ||..:.||             |.|||.          |||..|    
  Fly   411 RVQQQQRENLASAMAAGMRHHPLLPPPEAMHANPFQLLRMPLPPALAQAGNVVPTVAPLFGRPSP 475

  Fly   390 ---------------HSG----------------QGQV----------------------QGEQY 401
                           |.|                .|||                      :|...
  Fly   476 ADHYRMEQLVSEQFRHHGFNLAAAAAAAQAQFNANGQVVGGVVSGSGEPRPPSSSSSGSQRGSVP 540

  Fly   402 PIRLPFAPPVAPVGQEQHQNQVEEPEEIRQEIPVPQAEDLSKPMVKEKEKSHSPVERVKTPKEVK 466
            |..||  ||.....|:|.|.|.     ::|:......:.|.....:::.:..|..::..||..| 
  Fly   541 PAALP--PPSLSSQQQQQQQQA-----VQQQQQQGAQQQLQSAQQQQQSQQQSQQQQQITPGLV- 597

  Fly   467 TDAALPSSEKPE--------KEISKPVVTSSRRNGSVRKRQTSAVSPPQEDRERDLVEHLHIAKL 523
              .....|.|.|        :.:.:...|:|...||.  ..:|:.||.|:       :..|.|. 
  Fly   598 --GGAGGSLKLEPQQMDFYSQRLRQLAGTTSPGAGST--VNSSSPSPRQK-------QSPHFAS- 650

  Fly   524 VRRSSASRESQ------PAEYSLAQMERIIDKSWED------LIEIDKTSETSKLQQLVDNIENK 576
               .|.|::.|      |..:||...|::.|.|.|:      |....:::.|...:....:::..
  Fly   651 ---PSPSQQQQQQLATIPRPHSLTPPEKLGDASSENGSLGLILASTPRSASTPPSKTGDVSLQEP 712

  Fly   577 LTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQF 641
            :.....|.:|.|.....::|.:|.||||||:|::|..|                         .|
  Fly   713 IAHCYSCSYCDKKFRFENNLIIHQRTHTGEKPYKCTAC-------------------------DF 752

  Fly   642 KCPVCH-QKFSNGIILQQHIRIH--------TMDDGSGGQGAPAANPGEAERLGIEDQN---SNK 694
            :|  .| ||      |.:|:|:|        ..|:...|..|.:....||:  ..||.|   |.:
  Fly   753 EC--SHIQK------LMKHMRVHRSPADDQDNQDNQDDGSNADSLETNEAD--NDEDPNPDESEE 807

  Fly   695 SLGTSDTLDFSTTISDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREKE 759
            .||..|                 :...||.|    :|..|:..|.          ||...|.:.:
  Fly   808 ELGDGD-----------------NDPDGDGD----LDGEDEDEDE----------LEECEDMDYK 841

  Fly   760 RERRIPNDCSDERSHSNPDLT--GGRSESGE-MPAMDLSSPS----------SNSGRIFATGLAN 811
            .|....::..|.:|.| |..|  |..|..|| |....||:.:          ..|||..|...|.
  Fly   842 AEDLSVSNRIDGKSQS-PKTTSSGATSLVGELMDKFGLSNIAQYSEAYKQALQESGRKEAAAAAA 905

  Fly   812 GAAGGGSGN--GGLPMLGMPMPPNL--LLMAAAREEMHALGHAHAKFPLLPFGPLGFMGLHPPPN 872
            .||.....|  ||   .|.|:...|  |.:||.|                               
  Fly   906 AAAAAADNNNRGG---AGAPLSDKLNGLPVAALR------------------------------- 936

  Fly   873 VCNLCFKMLPSLAALESHLQSEHAKEPATGHAQRPQCSDAGSPYGAKLTLNPNLFAKKPPSSSSS 937
                              |:.|.||.  ....|:||  |.|:|                      
  Fly   937 ------------------LRDEFAKN--CNMFQQPQ--DGGAP---------------------- 957

  Fly   938 SSGEKLPESSNPPFPAENPPATPIKEDPDQEQLMVEEGASAGEGSGTGATSNYPQEAGD---AEQ 999
                    |..|.|   ||...|.:                       .:.....:.||   ..|
  Fly   958 --------SQVPLF---NPFPNPFE-----------------------LSKRMKMDGGDWWGMSQ 988

  Fly  1000 SLMKMQLHAHRFPASPLDFQQALMSAGPPTSSLDPPVNNKH------FCHVCRRNFSSSSALQIH 1058
            :|.:.:.........||       ..|...|.:..|:..|.      .|..|.:.|.:.|.|.:|
  Fly   989 ALHRNEALFENLKLKPL-------GLGGANSLIQGPLLKKESRQRNDTCEFCGKVFKNCSNLTVH 1046

  Fly  1059 MRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGR--------RMSLELPMRP-GPN 1114
            .|:|||:||::|.:|..|......|..||.||..|.....|.|        ..:||..||. ..|
  Fly  1047 RRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVN 1111

  Fly  1115 SG----------------------------------QGHPGSSAEQEFMQRRPELFFPYLPPFFN 1145
            .|                                  |.....:|:|...|::             
  Fly  1112 QGKAAAAANAVAAAQAAQAAAQHIQAAAQQAQAVQAQAVQAQAAQQSQQQQQ------------- 1163

  Fly  1146 GLPPKPGELSPGAFPNIPPPPFANGGKYPYPPGLLG------FPGFLAQHPYILERRSSSKSPTP 1204
                   :|||...... ||.|.:|.....|..:.|      .......||..|:..: ..|..|
  Fly  1164 -------QLSPMGVVGY-PPQFVSGHNLSLPGSVSGDNDSNASSSMTGVHPISLKEEAXLFSGFP 1220

  Fly  1205 EP-AQSPALREEE 1216
            .| |..|.|::.:
  Fly  1221 VPLAPPPPLQQHQ 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 2/21 (10%)
C2H2 Zn finger 323..343 CDD:275368 2/19 (11%)
zf-H2C2_2 335..360 CDD:290200 5/24 (21%)
C2H2 Zn finger 351..371 CDD:275368 4/52 (8%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
zf-H2C2_2 595..620 CDD:290200 11/24 (46%)
C2H2 Zn finger 611..631 CDD:275368 2/19 (11%)
C2H2 Zn finger 643..663 CDD:275368 7/20 (35%)
lambda-1 1013..>1061 CDD:212564 12/53 (23%)
zf-C2H2 1040..1062 CDD:278523 7/27 (26%)
C2H2 Zn finger 1042..1062 CDD:275368 7/19 (37%)
zf-H2C2_2 1054..1079 CDD:290200 11/24 (46%)
C2H2 Zn finger 1070..1090 CDD:275368 6/19 (32%)
CG9650NP_001356899.1 zf-C2H2 717..739 CDD:333835 6/21 (29%)
C2H2 Zn finger 719..739 CDD:275368 6/19 (32%)
zf-H2C2_2 731..756 CDD:338759 13/51 (25%)
C2H2 Zn finger 747..767 CDD:275368 10/52 (19%)
zf-C2H2 1029..1050 CDD:333835 7/20 (35%)
C2H2 Zn finger 1030..1050 CDD:275368 7/19 (37%)
zf-H2C2_2 1042..1067 CDD:338759 11/24 (46%)
C2H2 Zn finger 1058..1078 CDD:275368 6/19 (32%)
C2H2 Zn finger 1088..1106 CDD:275368 3/17 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447775
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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