DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment salr and Zfp219

DIOPT Version :9

Sequence 1:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:NP_001007682.1 Gene:Zfp219 / 305848 RGDID:1359259 Length:726 Species:Rattus norvegicus


Alignment Length:1014 Identity:200/1014 - (19%)
Similarity:282/1014 - (27%) Gaps:484/1014 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 CKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLPPGVAPN 387
            |..|||.|...|.|.:|||:|.|.:.|.|..||.:...:..|:.|.:.|                
  Rat    63 CPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTH---------------- 111

  Fly   388 VGHSGQGQVQGEQYPIRLPFAPPV--------------APVGQEQHQNQVEEPEEIRQEIPVPQA 438
                     |.|:     |.:|..              |.:|:.:....::..         |.|
  Rat   112 ---------QPER-----PRSPAARLLLELEERALLREARLGRARSSGGMQSS---------PAA 153

  Fly   439 EDLSKPMVKEKEKSHSPVERVKTPKEVKTDAALPSSEKPEKEISKPVVTSSRRNGSVRKRQTSAV 503
            |.|::|.|                         |||........|            .|.:||| 
  Rat   154 EGLARPQV-------------------------PSSSAFRCPFCK------------GKFRTSA- 180

  Fly   504 SPPQEDRERDLVEHLHIAKLVRRSSASRESQPAEYSLAQMERIIDKSWEDLIEIDKTSETSKLQQ 568
                 :|||    ||||.           .:|.:.||....   ....|:|:....|:..:..:.
  Rat   181 -----ERER----HLHIL-----------HRPWKCSLCSFG---SSQEEELLHHSLTAHGASERP 222

  Fly   569 LVDNIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERP---------------------FRCK 612
            |......:...|.|       ...||:|:..........|                     |||:
  Rat   223 LAATATPEPQPPPQ-------QEPRSALEPEPEPEPRPEPEREANPAPTPAPPEEPPAPPEFRCQ 280

  Fly   613 ICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIHTMD------DGSGG 671
            :||::|.....||.||..||..    ....||||.:.|.....|:.|:::||..      .|.|.
  Rat   281 VCGQSFTQSWFLKGHMRKHKAS----FDHACPVCGRCFKEPWFLKNHMKVHTSKLGPLRAPGPGS 341

  Fly   672 QGAPAANPGEAERLGIEDQNSNKSLGTSDTLDFSTTISDHSGQRSESSQGGDFDEFMTMDSTDDS 736
            ..|.|..|.:...|..|      .||.:..|                                  
  Rat   342 APARAPQPPDLSLLAYE------PLGPALLL---------------------------------- 366

  Fly   737 RDNSSAATATPHPLERERDREKERERRIPNDCSDERSHSNPDLTGGRS-ESGEM-PAMDLSSPSS 799
                 |...||            .|||.|           |.|.|..| .:||: |..:.:.|  
  Rat   367 -----APAPTP------------AERREP-----------PSLLGYLSVRAGEVRPNGEGADP-- 401

  Fly   800 NSGRIFATGLANGAAGGGSGNGGLPMLGMPMPPNLLLMAAAREEMHALGHAHAKFPLLPFGPLGF 864
                           |||...||                                          
  Rat   402 ---------------GGGRSYGG------------------------------------------ 409

  Fly   865 MGLHPPPNVCNLCFKMLPSLAALESHLQSEHAKEPATGHAQRPQCSDA-------GSPYGAKLTL 922
                         |:.|||  ||.:..:....:||    .:..:..:|       |...|:..:|
  Rat   410 -------------FRPLPS--ALPNRARRHRTEEP----EEEEEVVEAEEESWARGRSLGSLTSL 455

  Fly   923 NPNLFAKKPPSSSSSSSGEKLPESSNPPFPAENPPATPIKEDPDQEQLMVEEGASAGEGSGTGAT 987
            :||      |...|..|.           ||....|   :....||:..:..|.:..| :|.|||
  Rat   456 HPN------PGEGSGQSA-----------PAVGAQA---RSTATQEENGLLVGGTRSE-AGRGAT 499

  Fly   988 SNYPQEAGDAEQSLMKMQLHAHRFPASPLDFQQALMSAGPPTSSLDPPVNNKHFCHVCRRNFSSS 1052
            ..                                                   .|..|.::|.|:
  Rat   500 GK---------------------------------------------------DCPFCGKSFRSA 513

  Fly  1053 SALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTN-------------PTSRRGRRMS 1104
            ..|::|:|.|||::|::|..|..|.|..|:||.|:..|....             |.|:||   |
  Rat   514 HHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSSAGPGPPPEPPPPSQRG---S 575

  Fly  1105 LELPMRPGPNSG-----------QG----HPGSSAEQEFMQRRPELFFPYLPP---FFNGLPPKP 1151
            |:      |.||           :|    .|.||:.....:|:|      ..|   ..||   :.
  Rat   576 LQ------PQSGAKPTQASATWVEGTASTRPTSSSTGPGSRRKP------ASPGRTLRNG---RG 625

  Fly  1152 GELSP----------------GAFPNIPPPPFANGGKYPYPPGLLGFPGFLAQH----------- 1189
            ||..|                ||.......|||.|.           |..:|.|           
  Rat   626 GEAEPLDLSLRAGPGGEAGSGGALHRCLFCPFATGA-----------PELMALHLQVHHSRRARG 679

  Fly  1190 ----------PYILERRSSSKSPTPEPAQSPALREEEGS 1218
                      ||:       ::|:.|...||.| |||||
  Rat   680 RRQPRADTSPPYV-------RAPSGETPPSPPL-EEEGS 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 10/19 (53%)
C2H2 Zn finger 323..343 CDD:275368 10/19 (53%)
zf-H2C2_2 335..360 CDD:290200 10/24 (42%)
C2H2 Zn finger 351..371 CDD:275368 5/19 (26%)
C2H2 Zn finger 583..603 CDD:275368 3/19 (16%)
zf-H2C2_2 595..620 CDD:290200 8/45 (18%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 643..663 CDD:275368 7/19 (37%)
lambda-1 1013..>1061 CDD:212564 6/47 (13%)
zf-C2H2 1040..1062 CDD:278523 7/21 (33%)
C2H2 Zn finger 1042..1062 CDD:275368 7/19 (37%)
zf-H2C2_2 1054..1079 CDD:290200 10/24 (42%)
C2H2 Zn finger 1070..1090 CDD:275368 8/19 (42%)
Zfp219NP_001007682.1 C2H2 Zn finger 63..83 CDD:275368 10/19 (53%)
zf-C2H2 89..111 CDD:395048 6/21 (29%)
C2H2 Zn finger 91..111 CDD:275368 5/19 (26%)
C2H2 Zn finger 169..187 CDD:275368 9/39 (23%)
C2H2 Zn finger 195..211 CDD:275368 4/18 (22%)
zf-C2H2 277..299 CDD:395048 10/21 (48%)
C2H2 Zn finger 279..299 CDD:275368 8/19 (42%)
zf-C2H2 305..327 CDD:395048 7/21 (33%)
C2H2 Zn finger 307..327 CDD:275368 7/19 (37%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
zf-C2H2 503..523 CDD:395048 7/19 (37%)
zf-H2C2_2 515..537 CDD:404364 9/21 (43%)
zf-H2C2_5 529..552 CDD:404746 8/22 (36%)
C2H2 Zn finger 531..551 CDD:275368 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340122
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.