DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment salr and Zfp334

DIOPT Version :9

Sequence 1:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:XP_006499440.1 Gene:Zfp334 / 228876 MGIID:2388656 Length:690 Species:Mus musculus


Alignment Length:972 Identity:185/972 - (19%)
Similarity:294/972 - (30%) Gaps:381/972 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 HLMQLQLIQHLQSQLKRAEAAALGRHSHSDEEEEEPEPEPEPKKQPTNGLKEELELEQGPESEQD 220
            |:.:..:|..|:...:......|.|.:|:    |:.||..:.||.....||:...:...|..|:.
Mouse    61 HVSKPDVILKLEQGKEPWVVENLSRQNHA----EDDEPLEKDKKTQDKHLKQFSVVNSKPMLEKA 121

  Fly   221 QESRREE--NSKTDKRGTEDRKAEPEGYQSMMCDISSSLA------SSIITNHDPPPAPNEPNCL 277
            ..|.:..  |..:...|....|.:|.| ..:..:...::|      ..:..:.|   ...:|...
Mouse   122 NLSEKTVPLNMNSVSSGKTLHKYDPGG-NGLENNSEKTIAKPSKANGKVAADQD---GRGKPALH 182

  Fly   278 EMLQR--------RTEEVLDSASQSLHAAQMQ-----EEYSEYASKEAQSRG--------EIFKH 321
            ....|        |..||.|...|.....|.|     .:.||:...|.:|.|        |..::
Mouse   183 TKADRSHSAAKRYRRNEVRDVKGQGEGLTQQQNTQSASQPSEHREGEQESAGAARSEEQPERKRN 247

  Fly   322 RCKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLPPGVA- 385
            .|..|.|.|...|.|.:|||.||||||:.||.|...|..|.:|..|.:.||...|......|.| 
Mouse   248 ECAECRKTFSKRSTLIVHLRIHTGERPYACNYCRKTFRIKASLTRHQRIHTGERPYKCKECGKAF 312

  Fly   386 ----PNVGHSGQGQVQGEQYPIRLPFAPPVAPVGQEQHQNQVEEPEEIRQEIPVPQAEDLSKPMV 446
                ..:.|.   ::.|                |::.:     |..|..:..       ..|..:
Mouse   313 IDKSALIVHQ---RIHG----------------GEKSY-----ECNECGKTF-------FRKSAL 346

  Fly   447 KEKEKSHSPVERVKTPKEVKTDAALPSSEKPE--KEISKPVVTSSRRNGSVRKRQTSAVSPPQED 509
            .|..:||                   :.|||.  ||...   ...:::..:..::|.....|.|.
Mouse   347 AEHFRSH-------------------TGEKPYKCKECGN---AFGKKSYLIVHQRTHRGEKPNEC 389

  Fly   510 RERDLVEHLHIAKLVRRSSASRESQPAEYSLAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIE 574
            :|        ..|.....||          |...:||            .|.|            
Mouse   390 KE--------CGKTFFCLSA----------LTAHQRI------------HTGE------------ 412

  Fly   575 NKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRS 639
                .|.:|..|.|...|:|:|.:|:|:||||:|::|::||:...||..|.||..||:.|    .
Mouse   413 ----KPYECKECDKTFFCQSALNVHLRSHTGEKPYKCRLCGKYLCTKSALVAHQVIHRGK----K 469

  Fly   640 QFKCPVCHQKFSNGIILQQHIRIHTMDDGSGGQGAPAANPGEAERLGIEDQNSNKSLGTSDTLDF 704
            .|:||.|.:.|.....|..|.|.||                 .|:.|:..:.|.           
Mouse   470 TFECPECGKLFYLKSTLTIHQRTHT-----------------GEKHGLLSKWSR----------- 506

  Fly   705 STTISDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATATPHPLERERDREKERERRIPNDCS 769
                                                 |:.|.|:..|::|...|:.    .::|.
Mouse   507 -------------------------------------ASAAKPNCSEQKRADAKDN----VHECH 530

  Fly   770 DERSHSNPDLTGGRSESGEMPAMDLSSPSSNSGRIFATGLANGAAGGGSGNGGLPMLGMPMPPNL 834
            |.:                       .|:..|.|.|                             
Mouse   531 DHK-----------------------RPAHKSSRRF----------------------------- 543

  Fly   835 LLMAAAREEMHALGHAHAKFPLLPFGPLGFMGLHPPPNVCNLCFKMLPSLAALESHLQSEHAKEP 899
                           ||.:            .:...|..|..|.:.....:||..| |..|    
Mouse   544 ---------------AHKR------------TIWERPYECEECGRTYCRKSALRHH-QKTH---- 576

  Fly   900 ATGHAQRP-QCSDAGSPYGAKLTLNPNLFAKKPPSSSSSSSGEKLPESSNPPFPAENPPATPIKE 963
             ||  :|| :|.:.|..:..|::...:         ..:.:|||                     
Mouse   577 -TG--ERPYECKECGKTFCQKVSFTEH---------QRTHTGEK--------------------- 608

  Fly   964 DPDQEQLMVEEGASAGEGSGTGATSNYPQEAGDAEQSLMKMQLHAHRFPASPLDFQQALMSAGPP 1028
                                       |.:..:..:|.      .|:   |.....:.:.:...|
Mouse   609 ---------------------------PHKCKECGKSF------RHK---SAFTVHKRIHTGEKP 637

  Fly  1029 TSSLDPPVNNKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTH 1090
                       :.|:.|.:::.....|..|.:.|||:||::||:|:|:|..|.|..:|..||
Mouse   638 -----------YACNECGKSYRRLWTLTEHQKIHTGEKPYECNLCKKSFRHKSNFLLHQKTH 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 9/21 (43%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
zf-H2C2_2 335..360 CDD:290200 14/24 (58%)
C2H2 Zn finger 351..371 CDD:275368 7/19 (37%)
C2H2 Zn finger 583..603 CDD:275368 8/19 (42%)
zf-H2C2_2 595..620 CDD:290200 11/24 (46%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 643..663 CDD:275368 7/19 (37%)
lambda-1 1013..>1061 CDD:212564 6/47 (13%)
zf-C2H2 1040..1062 CDD:278523 4/21 (19%)
C2H2 Zn finger 1042..1062 CDD:275368 4/19 (21%)
zf-H2C2_2 1054..1079 CDD:290200 12/24 (50%)
C2H2 Zn finger 1070..1090 CDD:275368 8/19 (42%)
Zfp334XP_006499440.1 KRAB 20..79 CDD:214630 3/17 (18%)
C2H2 Zn finger 249..269 CDD:275368 9/19 (47%)
COG5048 273..689 CDD:227381 134/752 (18%)
C2H2 Zn finger 277..297 CDD:275368 7/19 (37%)
C2H2 Zn finger 305..325 CDD:275368 3/22 (14%)
C2H2 Zn finger 333..353 CDD:275368 3/26 (12%)
C2H2 Zn finger 361..381 CDD:275368 2/22 (9%)
C2H2 Zn finger 389..409 CDD:275368 7/49 (14%)
C2H2 Zn finger 417..437 CDD:275368 8/19 (42%)
C2H2 Zn finger 445..465 CDD:275368 8/19 (42%)
C2H2 Zn finger 473..493 CDD:275368 7/19 (37%)
C2H2 Zn finger 556..576 CDD:275368 6/20 (30%)
C2H2 Zn finger 584..604 CDD:275368 3/28 (11%)
C2H2 Zn finger 612..632 CDD:275368 3/28 (11%)
C2H2 Zn finger 640..660 CDD:275368 4/19 (21%)
C2H2 Zn finger 668..688 CDD:275368 8/19 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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