DRSC/TRiP Functional Genomics Resources

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Protein Alignment salr and Zfp27

DIOPT Version :9

Sequence 1:NP_001245983.1 Gene:salr / 34568 FlyBaseID:FBgn0000287 Length:1267 Species:Drosophila melanogaster
Sequence 2:NP_001032796.1 Gene:Zfp27 / 22689 MGIID:99174 Length:819 Species:Mus musculus


Alignment Length:1069 Identity:216/1069 - (20%)
Similarity:338/1069 - (31%) Gaps:381/1069 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 SLEALQHTKVAVAQFAATAMAGNHQSA-DLAMVQSTIFNVQRQHLMQLQLIQHLQSQL----KRA 173
            |:|.||.    :.....|.....|:|| |:..:..|:..........::.:.|:.|.:    ||.
Mouse    36 SVEELQQ----IGDQKKTYQQIGHKSASDMVFITKTLGAESCHDYSGVRKVIHVNSYIVLPPKRP 96

  Fly   174 EAAALGRHSHSDEEEEEPEPEPEPKKQPTNGLKEELELEQGPESEQDQESRREENS-KTDKRGTE 237
            .        |.|..|:|                        |:...|.::..|.|. |..||.||
Mouse    97 R--------HWDPPEDE------------------------PKHSSDLQTHDESNGLKRTKRITE 129

  Fly   238 DRKAEPEGYQSMMCDISSSLASSIITNHDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQE 302
            ..|            |||.:.:..|...:..|..|:  |.::|..:.   :....|.:|..:...
Mouse   130 YGK------------ISSCINTEHILTGEKLPDHNQ--CGKVLGYKQ---IPCQYQKIHTGEKSY 177

  Fly   303 EYSEYA---SKEAQSR-------GE---------------------------------------- 317
            |.:|:.   ::::|.|       ||                                        
Mouse   178 ECAEFGKIFTQKSQLRVHVTSPTGEKLYVCVECGKACSQTSEFLTHQKTHTREKPYKCGDCGKSF 242

  Fly   318 -----IFKHR----------CKYCGKIFGSYSALQIHLRSHTGERPFVCNVCGSKFTTKGNLKVH 367
                 :|:||          |.:|||.|...|.|:||.:.||||:...|..||..||.|..|::|
Mouse   243 FQVSSLFRHRRIHTGEKLYDCSHCGKGFSYNSDLRIHQKIHTGEKRHGCVDCGKAFTQKSTLRMH 307

  Fly   368 YQRHTQIFPPMLLPPGVAPNVGHSGQGQVQGEQYPIRLPFAPPVAPVGQEQH---QNQVEEPEEI 429
            .:.||                         ||:..:.:.......   |:.|   ..::...|: 
Mouse   308 QKIHT-------------------------GERAYVCIECGQAFI---QKTHLVAHRRIHTGEK- 343

  Fly   430 RQEIPVPQAED------LSKPMVKEKEKSHSPVERVKTPKEVKTDAALPSSEKPEKEISKPVVTS 488
                  |.|.|      |||..:...::.||.|...     |..|.|.|.|..|.....|     
Mouse   344 ------PYACDGCGKAFLSKSQLLVHQRIHSRVRPC-----VSLDRAKPFSSAPNLLPRK----- 392

  Fly   489 SRRNGSVRKRQTSAVSPPQEDRERDLVEHLHIAKLVRRSSASRESQPAEYSLAQMERIIDKSWED 553
                 .|:.|:.|::.                               ||...|...|      .:
Mouse   393 -----KVQMREKSSIC-------------------------------AECGKAFTYR------SE 415

  Fly   554 LIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAF 618
            ||...:|....|              |.||..|.|..:.:|:|.:|.|.||||:.:.|..||.||
Mouse   416 LIIHQRTHTGEK--------------PYQCGDCGKAFTQKSALTVHRRIHTGEKSYVCVKCGLAF 466

  Fly   619 ATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIHTMDDGSGGQGAPAANPGEAE 683
            ..:.:|.||..||..:.|    ::|..|.:.|::...|..|.||||     |.:....:|.|:| 
Mouse   467 VQRAHLDAHQVIHTGEKP----YQCGHCGKFFTSKSQLHVHKRIHT-----GEKPYVCSNCGKA- 521

  Fly   684 RLGIEDQNSNKSLGTSDTLDFSTTISDHSGQRS--------ESSQGGDFDEFMTMDSTDDSRDNS 740
                   .:|:|       :..|....|:|:::        ..:|..|......:.:.:.....|
Mouse   522 -------FANRS-------NLITHQKTHTGEKAYVCARCGKAFTQRSDLVTHQRIHTGEKPYGCS 572

  Fly   741 S---AATATPHPLERERDREKERERRIPNDCSDERSHSNPDLTGGRSESGEMPAMDLSSPSSNSG 802
            :   |.|...|....|:....||:... .||....:..:..:...:..:||.|.:     .:..|
Mouse   573 TCGKAFTQKSHLSIHEKIHTGERQYGC-RDCGKAFNQKSILIVHQKIHTGEKPHV-----CAECG 631

  Fly   803 RIFATGLANGAAGGGSGNGGLPMLGMPMPPNLLLMAAAREEMHALGHAHAKFPLLPFGPLGFMGL 867
            |.|.                       ...|.:        .|...|...|    |:|       
Mouse   632 RAFI-----------------------RKSNFI--------THQRIHTGEK----PYG------- 654

  Fly   868 HPPPNVCNLCFKMLPSLAALESHLQSEHAKEPATGHAQRPQCSDAGSPYGAKLTLNPNLFAKKPP 932
                  |..|.|...|.:.|..|......::|..       |::.|..:..:..|:.:       
Mouse   655 ------CTDCGKSFTSKSQLLVHRPIHTGEKPYV-------CAECGKAFSGRSNLSKH------- 699

  Fly   933 SSSSSSSGEKLPESSNPPFPAENPPATPIKEDPDQEQLMVEEGASAGEGSGTGATSNYPQEAGDA 997
              ..:.:|||       |:......    |....:.:|:.......||         .|.:.||.
Mouse   700 --QKTHTGEK-------PYACSECG----KSFRQKSELITHHRIHTGE---------KPYDCGDC 742

  Fly   998 EQSL-MKMQLHAHRFPASPLDFQQALMSAGPPTSSLDPPVNNKHFCHVCRRNFSSSSALQIHMRT 1061
            .:|. .|.||..|          |.:.:...|           :.|..|.:.|:..|.|..|..|
Mouse   743 GKSFTKKSQLQVH----------QRIHTGEKP-----------YRCAECGKAFTDRSNLNKHQTT 786

  Fly  1062 HTGDKPFQCNVCQKAFTTKGNLKVHMGTH 1090
            |||:||::|.||.|.|..|..|.:|...|
Mouse   787 HTGEKPYKCVVCGKGFVQKSVLSIHENVH 815

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
salrNP_001245983.1 zf-C2H2 321..343 CDD:278523 11/31 (35%)
C2H2 Zn finger 323..343 CDD:275368 9/19 (47%)
zf-H2C2_2 335..360 CDD:290200 11/24 (46%)
C2H2 Zn finger 351..371 CDD:275368 8/19 (42%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
zf-H2C2_2 595..620 CDD:290200 12/24 (50%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 643..663 CDD:275368 6/19 (32%)
lambda-1 1013..>1061 CDD:212564 8/47 (17%)
zf-C2H2 1040..1062 CDD:278523 6/21 (29%)
C2H2 Zn finger 1042..1062 CDD:275368 6/19 (32%)
zf-H2C2_2 1054..1079 CDD:290200 13/24 (54%)
C2H2 Zn finger 1070..1090 CDD:275368 8/19 (42%)