DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppt2 and Ppt2

DIOPT Version :10

Sequence 1:NP_609500.1 Gene:Ppt2 / 34564 FlyBaseID:FBgn0032358 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_062240.1 Gene:Ppt2 / 54398 RGDID:620375 Length:302 Species:Rattus norvegicus


Alignment Length:286 Identity:118/286 - (41%)
Similarity:168/286 - (58%) Gaps:1/286 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LRLQVLVALLTCSSISVSLAYKPVVILHGILSGAESMASLVREIEEFHPGTIVYNCDKFNGWYSL 67
            |.|..|..||..:......:||||:::||:...:.|...|:..|.|.||||:|...|.|:|..||
  Rat    16 LLLPFLPLLLPAAPAPHRGSYKPVIVVHGLFDSSYSFRHLLDYINETHPGTVVTVLDLFDGRESL 80

  Fly    68 ENAWRQVDQVRDYLNEVGKLHPEGIIVLGYSQGGLLARAAIQSLPEHNVKTFISLSSPQAGQYG- 131
            ...|.||...|:.:..:.:..|||:.::.||||||:.||.:..:.||||.:||||||||.|||| 
  Rat    81 RPLWEQVQGFREAVVPIMEKAPEGVHLICYSQGGLVCRALLSVMDEHNVDSFISLSSPQMGQYGD 145

  Fly   132 TSFLHLIFPDLAAKTAFELFYSRVGQHTSVGGYWNDPQRQDLYLKYSEFLPLINNEKKTSNSTSF 196
            |.:|..:||.......:.:.||..||..|:..||:||...||||..|.||.|||.|:...|:|::
  Rat   146 TDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAW 210

  Fly   197 KMGMVRLNKLVMIGGPNDDVITPWQSSHFGYFDENMDVIPFIRRPIFTSDSIGIRTLQEAGKLII 261
            :...:|:.:||:||||:|.||||||||.||::|.|..|:....:|::..||.|::||...|.::.
  Rat   211 RKNFLRVGRLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQPVYLRDSFGLKTLLARGAIVR 275

  Fly   262 VVKPHVHHLAWHTRRDVIHEVIFPYL 287
            .....|.|..||:.|.:....|.|:|
  Rat   276 CPMAGVSHTTWHSNRTLYDACIEPWL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppt2NP_609500.1 Palm_thioest 25..268 CDD:460441 103/243 (42%)
Ppt2NP_062240.1 Palm_thioest 38..283 CDD:460441 104/245 (42%)

Return to query results.
Submit another query.