DRSC/TRiP Functional Genomics Resources

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Protein Alignment ab and zbtb20

DIOPT Version :9

Sequence 1:NP_476562.1 Gene:ab / 34560 FlyBaseID:FBgn0264442 Length:904 Species:Drosophila melanogaster
Sequence 2:XP_021331970.1 Gene:zbtb20 / 568779 ZFINID:ZDB-GENE-070112-1992 Length:707 Species:Danio rerio


Alignment Length:708 Identity:136/708 - (19%)
Similarity:223/708 - (31%) Gaps:227/708 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 NDFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSPYF--RRLLKANPCEHPIVILR 145
            ::|.:|:|.:....|:...|.|||:........||:.||:|.||:|  :.||..:..|.|.|   
Zfish    31 HNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKLLLGYSDIEIPSV--- 92

  Fly   146 DVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLADV-------------NGGY---- 193
             |....|:.|:.|||:|.:.||..:....|..|.:|||:.:.|.             :|.:    
Zfish    93 -VSVQSVQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIVSQNVGISGSGSFSVVP 156

  Fly   194 ------------------PYSKALSAAL--SHNSSNNNNNNSSSNNSLSNNNNNNNNN----AES 234
                              |.|.|.|..:  ||.|..::..:|.|...|.|....|.::    |..
Zfish   157 GDSGQETPRGTPESGTSGPSSDAESGYMQTSHQSVYSSLYSSCSGLGLQNGTRGNRSHYAGAAVI 221

  Fly   235 SNHN-------------------------KISSYLSPNQTSAA---------------------- 252
            :|::                         ::..:||..:|:..                      
Zfish   222 ANYDSALPLQQKEAGQDPAWITRIHERSQQMERFLSTTETTHCRKQPRPVRLHPGDIHIKQEQGD 286

  Fly   253 ---------CNNSSNSNSNNHSSSHNNSSSNNISGSLNS---SLNSPFSAPQIPPPVTASSAAAA 305
                     |...........|.....|..:.:|.|:.:   |:..||                 
Zfish   287 EFNCYGIEDCREDGEPLECVESEPKGESFDSGVSSSIGTETDSVEQPF----------------- 334

  Fly   306 AAAAASLTAAVAAAAAATAASAGSSSSAASGQTSGTPAIQELKASSAASPVRNPNPNPSKASSSN 370
                              .:.....|....|: .|||...|:..|   ||.:........:.:..
Zfish   335 ------------------LSGFNCPSKGQQGE-RGTPVQIEVNDS---SPEQTQEIIEDSSGNGP 377

  Fly   371 HWDMGEMEGSRKSHLTPPPQKRIKSADLFRAQHGISPERLLLDREFPVAG--QHPLTRNRSGRDT 433
            ..:.||: |..:::||.|.               :.|....|....|:..  :.|||        
Zfish   378 TQESGEI-GIHQANLTAPQ---------------VMPGGPYLRPGEPLTSNLRMPLT-------- 418

  Fly   434 SKDRERNLELRESLLGQALENSNGQQANPKHELGQSAGEDSNSSDTEPSDRGDGQHDGTLDGIDN 498
                   |.....::|.|     |....|.....|||.::.....:.|...|..|..  ...:.:
Zfish   419 -------LTSNSQVMGTA-----GNTYLPTLFATQSASDNKPFLFSLPQSIGSQQPQ--FVAVPS 469

  Fly   499 QRSHSFPNAFLGLQGIPGLLPG-------PSGINSD------------FVSRRSL--EMRVRATD 542
            .....||.   ||...||   |       |.|.:.:            |.::::.  .|.|...:
Zfish   470 PNMPPFPG---GLSVPPG---GSQQQGGAPGGQHGEKKPYACTLCCKTFTAKQNYVKHMFVHTGE 528

  Fly   543 -PRPCPKCGKIYRSAHTLRTHLEDKHTVCPGYRCVLCGTVAKSRNSLHSHMSRQHRGISTKDLPV 606
             |..|..|.:.:.....|..|:. .||....|:|.:|......::||:.|| |.|||..:.:..:
Zfish   529 KPHQCSICWRSFSLKDYLIKHMV-THTGVRAYQCSICNKRFTQKSSLNVHM-RLHRGEKSYECYI 591

  Fly   607 LPMPSAFDPELASRL-LAKAGVKISPAELRARASPTGGSGSSGGGGGGGSSQAKLDLS 663
            .....:....|...: |...|..:|           |.||.||.|..||.:...:.::
Zfish   592 CKKKFSHKTLLERHMALHSTGSGVS-----------GVSGVSGAGSAGGPASIPVPMA 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abNP_476562.1 BTB 93..189 CDD:279045 32/97 (33%)
BTB 104..189 CDD:197585 30/86 (35%)
zf-Di19 545..597 CDD:283297 14/51 (27%)
C2H2 Zn finger 546..567 CDD:275371 4/20 (20%)
C2H2 Zn finger 575..596 CDD:275371 7/20 (35%)
zbtb20XP_021331970.1 BTB 41..143 CDD:306997 33/105 (31%)
C2H2 Zn finger 505..525 CDD:275368 2/19 (11%)
zf-C2H2 531..553 CDD:306579 4/22 (18%)
C2H2 Zn finger 533..553 CDD:275368 4/20 (20%)
zf-H2C2_2 545..570 CDD:316026 7/25 (28%)
zf-C2H2 559..581 CDD:306579 8/22 (36%)
C2H2 Zn finger 561..581 CDD:275368 7/20 (35%)
zf-H2C2_2 573..598 CDD:316026 8/25 (32%)
C2H2 Zn finger 589..609 CDD:275368 1/19 (5%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 100 1.000 Inparanoid score I4989
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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