DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ab and Zbtb20

DIOPT Version :9

Sequence 1:NP_476562.1 Gene:ab / 34560 FlyBaseID:FBgn0264442 Length:904 Species:Drosophila melanogaster
Sequence 2:XP_006522470.1 Gene:Zbtb20 / 56490 MGIID:1929213 Length:746 Species:Mus musculus


Alignment Length:737 Identity:148/737 - (20%)
Similarity:246/737 - (33%) Gaps:232/737 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QTAENNNA---------GVVKMEPPPPATSSVSVSAAAAA--HALSSLSSLTMAATGSALSPATP 61
            :||||..|         |....:|..|..:..:|.:.|.|  |:..||:: :.|.|||:      
Mouse    13 KTAENQKASEENEITQPGGSSAKPALPCLNFEAVLSPAPALIHSTHSLTN-SHAHTGSS------ 70

  Fly    62 PPSLNLSHQQQQHQQHYALKWNDFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSP 126
              ..::|.:....:.| ::..::|.:|:|.:....|:...|.|||:........||:.||:|.||
Mouse    71 --DCDISCKGMTERIH-SINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSP 132

  Fly   127 YF--RRLLKANPCEHPIVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGL--- 186
            :|  :.||..:..|.|.|    |....|:.|:.|||:|.:.||..:....|..|.:|||:.:   
Mouse   133 FFQDKLLLGYSDIEIPSV----VSVQSVQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDE 193

  Fly   187 ------------------------------------ADVNGGYPYS-------KALSAALSHNSS 208
                                                :|...||..|       :..||..:.:..
Mouse   194 CTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQSHPQHSVDRIYSALYACSMQ 258

  Fly   209 NNNNNNSSSNNSLSNNNNN-----NNNNAESSN-----HNK---ISSYLS--PNQT--------- 249
            |.:...|..:.::.:::..     .:::.|..:     |.:   :..|||  |..|         
Mouse   259 NGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRIHERSQQMERYLSTTPETTHCRKQPRPV 323

  Fly   250 ----------------------------------SAACNNSSNSNSNNHSSSHNNSSSNNISGSL 280
                                              |..|...::......|.....|..:.:|.|:
Mouse   324 RIQTLVGNIHIKQEMEDDYDYYGQQRVQILERNESEECTEDTDQAEGTESEPKGESFDSGVSSSI 388

  Fly   281 NSSLNSPFSAPQIPPPVTASSAAAAAAAAASLTAAVAAAAAATAASA--------GSSSSAASGQ 337
            .:.          |..|.....|||.....:..|....||.|.|.|:        |:||...|.:
Mouse   389 GTE----------PDSVEQQFGAAAPRDGQAEPAQPEQAAEAPAESSAQPNQLEPGASSPERSNE 443

  Fly   338 TSGTPAIQELKASSAASPVRNPNPNPS--KASSSNHWDMGEMEGSRKSHLTPP-----PQKRIKS 395
            :.....:..:..||....::.|:.|.|  :...|....:.:.| :..|:|..|     ..:.|.:
Mouse   444 SEMDNTVITVSNSSDKGVLQQPSVNTSIGQPLPSTQLYLRQTE-TLTSNLRMPLTLTSNTQVIGT 507

  Fly   396 AD------LFRAQ-HGISPERLLLDREFPVAGQHP--LTRNRSGRDTSKDRERNLELRESLLGQA 451
            |.      ||..| .|..|:..|.....|:.||..  :|.::.|                     
Mouse   508 AGNTYLPALFTTQPAGSGPKPFLFSLPQPLTGQQTQFVTVSQPG--------------------- 551

  Fly   452 LENSNGQQANPKHELGQSAGED--SNSSDTEPSDRGDGQHDGTLDGIDNQRSHSFPNAFLGLQGI 514
            |.....|...|: .|..|||..  |...|.:|       ::.||                     
Mouse   552 LSTFTAQLPAPQ-PLASSAGHSTASGQGDKKP-------YECTL--------------------- 587

  Fly   515 PGLLPGPSGINSDFVSRRSL--EMRVRATD-PRPCPKCGKIYRSAHTLRTHLEDKHTVCPGYRCV 576
                     .|..|.::::.  .|.|...: |..|..|.:.:.....|..|:. .||....|:|.
Mouse   588 ---------CNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMV-THTGVRAYQCS 642

  Fly   577 LCGTVAKSRNSLHSHMSRQHRG 598
            :|......::||:.|| |.|||
Mouse   643 ICNKRFTQKSSLNVHM-RLHRG 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abNP_476562.1 BTB 93..189 CDD:279045 32/136 (24%)
BTB 104..189 CDD:197585 30/125 (24%)
zf-Di19 545..597 CDD:283297 14/51 (27%)
C2H2 Zn finger 546..567 CDD:275371 4/20 (20%)
C2H2 Zn finger 575..596 CDD:275371 7/20 (35%)
Zbtb20XP_006522470.1 BTB_POZ_ZBTB20_DPZF 84..200 CDD:349517 36/120 (30%)
zf-C2H2 583..605 CDD:395048 5/51 (10%)
C2H2 Zn finger 585..605 CDD:275368 5/49 (10%)
SUF4-like 613..>662 CDD:411020 14/50 (28%)
C2H2 Zn finger 613..634 CDD:411020 4/21 (19%)
C2H2 Zn finger 613..633 CDD:275368 4/20 (20%)
zf-C2H2 639..661 CDD:395048 8/22 (36%)
C2H2 Zn finger 641..661 CDD:411020 7/20 (35%)
C2H2 Zn finger 641..661 CDD:275368 7/20 (35%)
zf-H2C2_2 653..678 CDD:404364 8/12 (67%)
C2H2 Zn finger 669..689 CDD:275368
C2H2 Zn finger 722..742 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.