DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ab and rib

DIOPT Version :9

Sequence 1:NP_476562.1 Gene:ab / 34560 FlyBaseID:FBgn0264442 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster


Alignment Length:818 Identity:184/818 - (22%)
Similarity:286/818 - (34%) Gaps:254/818 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 QHYALKWNDFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSPYFRRLLKANPCEHP 140
            |.|.|:||:.|::::.....|.:...:||.:|..|:..|.||:|||:|.||||:.:||..|.:|.
  Fly    16 QTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHC 80

  Fly   141 IVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLADVNGGYPYSKALSAALSH 205
            .:||..|:..::..||.:||.||..|:..|.|:.|:||..||::||.|     ...|...|:::.
  Fly    81 SIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYD-----NLMKFNHASVTP 140

  Fly   206 NSSNNNNNNSSSNNSLSNNNNNNNNNAESSNHNKISSYLSPNQTSAACNNSSN---------SNS 261
            .||:........|.|.||:         ||:....|:::||   |||.::|.:         ...
  Fly   141 TSSSGAGGAKPQNGSASNH---------SSSVISTSTHISP---SAAISSSCSPPPPPQFGYQPG 193

  Fly   262 NNHSSSHNNSSSNNISGSLNSSLNSPFSAPQIPPPVTASSAAAA--------AAAAASLTAAVAA 318
            .:|.......|::.|...     .:|.:..|..|...||.|..|        :||||.|.:...:
  Fly   194 YSHYPQQQPMSASQIPAG-----EAPLTPTQATPHSAASGAGEAGGQWPLTPSAAAAMLNSVYES 253

  Fly   319 AAAATAASAGSSSSAASGQTSG---TPAIQELKASSAASPVRNPNPNPSKASSS----------- 369
            ||..........|:.:|...||   ||.::.:.|.  |:|..:..|.|..|:..           
  Fly   254 AADMNPLKRKKLSAISSMLLSGNRDTPILRNVLAQ--ANPADSSQPGPMNANGEKTPTHPHQNTQ 316

  Fly   370 ------------NHWDMGEMEGSRKSHLTP-----------------PPQKRIKS---ADLFRA- 401
                        ||...|...|..|..|:|                 |..||.|.   ||:..| 
  Fly   317 LPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQSGGKKPEWKRYKQYTRADMMCAI 381

  Fly   402 ---QHGIS----------PERLLLD--REFPVAGQHPLTRNRSGRDTSKDRERNLELRESLLGQA 451
               :.|:|          |.|.|.|  |:..:.         :||.|.:..:|:....||..|.:
  Fly   382 QAVREGMSALQASRKYGLPSRTLYDKVRKLNIT---------TGRGTHRTPKRSPPGAESSQGFS 437

  Fly   452 LENSNGQQANPKHELGQSAGEDSNSSDTEPSDRGDGQHDGTLDGIDNQRSHSFPNAFLGLQGIPG 516
            .   :...|...|..|...|..|.....:..|.....|                       |:|.
  Fly   438 Y---SAAAAAAAHNYGHGHGHHSEVKRDQKVDHVPAHH-----------------------GMPP 476

  Fly   517 LLPGPSGINSDFVSRRSLEMRVRATDPRPCPKCGKIYRSAHTLRTHLEDKHTVCPGYRCVLCGTV 581
            .:|                           |....:...|. |:..||::            |..
  Fly   477 TIP---------------------------PSAAALLDHAF-LQQALENR------------GGD 501

  Fly   582 AKSRNSLHSHMSRQHRGISTKDLPVLPMPSAFDPELASRLLAKAGVKISPAELRARASPTGGSGS 646
            ...|.:||:                  |..|.....|:..|:.     ||||:..|::..|....
  Fly   502 MAGREALHA------------------MALAAAAHAAANRLSS-----SPAEMDQRSNGHGMRSP 543

  Fly   647 SGGGGGGGSSQAKLDLSNAS--------GGPMDDAEDSDDDPEDLTTGNGLYGMGGSSSDLSRYH 703
            |..|......|..:||....        ....|:.||:||: ||                   :.
  Fly   544 SPQGRHYPHEQEAMDLEMEKHEQNIIKRERDQDEREDADDE-ED-------------------HE 588

  Fly   704 ESLLSNFGHARMRNEAAAVAATAAALGQPKDLG----VQLPNSNAPGQSLLD--TYLQFITENTF 762
            :..:.:...||.....:..:.      ||.:.|    :...:::|.|:..:|  :..||:.    
  Fly   589 QEHVEDLSLARKERPPSPYSP------QPTEAGAGVIMHASSASANGKDHVDYPSSPQFVP---- 643

  Fly   763 GMGMSQE-------QAAAAALRAKMAQLNAMGHSLDNL 793
             :|:.:|       ||.|. |...||...|. .|||:|
  Fly   644 -IGLKRELMEGEDAQARADXLTLTMAWQYAT-DSLDSL 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abNP_476562.1 BTB 93..189 CDD:279045 39/95 (41%)
BTB 104..189 CDD:197585 37/84 (44%)
zf-Di19 545..597 CDD:283297 9/51 (18%)
C2H2 Zn finger 546..567 CDD:275371 5/20 (25%)
C2H2 Zn finger 575..596 CDD:275371 4/20 (20%)
ribNP_001261085.1 BTB 33..133 CDD:279045 40/104 (38%)
BTB 44..133 CDD:197585 38/93 (41%)
HTH_psq 373..417 CDD:283007 10/52 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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